Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1603 |
Symbol | |
ID | 5090954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 1851728 |
End bp | 1853551 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644741010 |
Product | thiamine biosynthesis protein ThiC |
Protein accession | YP_001193954 |
Protein GI | 146299363 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.517064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTACAG AAGAACAAAT ATCCAGAACC CCATTTCCAA ACTCTAAAAA AGTCTATATC GACGGAGAAA TTCACCCAAT AAAAGTAGCC ATGCGCGAAA TTACTTTAAA TGATACCAAA CTTTCAAACG GAGGAATTGA AAAAAATCCA CCTGTAACCG TTTACGATAC TTCCGGACCA TATACTGATC CAAATGTAGA AATTGATATT AGAAAAGGAT TACCACGCTT ACGCGAAAAA TGGATTCTTG ACAGAAATGA TGTTGAAATT TTAAGTGAAA TCACATCAGA TTACGGACAA AGCCGATTGA AAGATGAAAG TCTGAATCAT CTTCGATTTG AATATTTACA TCAGCCAAAA CGTGCTAAAA AAGGTGCAAA CGTAACACAA TTGTATTACG CTAAGCAAGG TATTATTACG CCGGAAATGG AATATATCGC GATTCGTGAA AACCAGCGTA TCGAACTTTT AAACGAGCAG ACTAAAGCAA TGCAATGCCA GCACAGCGGA GAGAGTTTTG GTGCGAATAC ACCAAAAAGC AAAATTACCC CAGAATTTGT CCGTTCAGAA GTTGCCTGCG GGAGAGCAAT TATTCCAAAT AATATCAATC ATCCAGAAAG CGAACCTATG ATTGTGGGGC GCAATTTCCT GGTAAAAATT AATGCCAATA TCGGAAACAG TGCTGTGACT TCGAGTATTG AAGAAGAAGT TGAAAAAGCC GTTTGGGCTT GCCGCTGGGG AGCTGATACG ATTATGGATT TATCTACGGG AAAAAACATT CATGAAACCA GAGAATGGAT TATTAGAAAT TCTCCTGTTC CAATTGGCAC CGTTCCAATT TATCAGGCTT TAGAAAAAGT AAAAGGAGTT GCCGAGGATT TAACTTGGGA GATTTTCCGT GACACCTTGA TTGAACAAGC AGAACAAGGC GTTTCATACT TTACAATTCA CGCCGGAGTT TTACTTCGTT ATATTCATTT AACTGCAAAT AGAGTTACTG GAATTGTTTC TCGCGGCGGT TCAATCATGG CAAAATGGTG TTTGTTTCAT CATAAAGAAA ATTTCCTTTA TACACATTTT GAAGAAATTT GTGAAATCAT GAAACAATAC GATGTCGCTT TTTCTTTGGG AGACGGTTTA CGTCCGGGTT CGATTGCAGA TGCGAATGAT GCTGCTCAAT TTGCAGAATT AGAAACTTTA GGAGAATTGA CAAAAATTGC CTGGAAACAT GATGTACAGG TTTTCATTGA AGGTCCGGGA CACGTTCCGA TGCACATGAT CAAAGAAAAC ATGGAAAAAC AATTAGAACA TTGTCATGAG GCACCATTTT ATACTTTAGG CCCATTAACT ACAGATATTG CACCGGGTTA TGATCATATT ACATCTGCAA TTGGCGCTGC AATGATTGGC TGGTATGGCT GTGCAATGCT GTGTTATGTA ACGCCAAAAG AACATCTGGG TTTACCGAAC AAAAAAGATG TAAAAGACGG CGTGATTACC TATAAAATTT CGGCACATGC CGCCGACTTG GCAAAAGGTC ATCCGGGAGC GCAATATCGA GACAACGCTT TGAGTAAAGC TCGTTTTGAA TTCCGCTGGG AAGACCAGTT TAATTTAGCA TTAGATCCTG ACACTGCAAG AGAATTTCAT GATGAAACAC TTCCGGCAGA TGGTGCAAAA GTGGCACATT TCTGTTCGAT GTGTGGACCA AAATTCTGCT CTATGAAAAT TTCTCAGGAA ATTAGAGATG TCGCAGCTGC AGAAAAAGGA ATGCAGGAGA AATCAGAGGA ATTTATTGAA CAGGGAAAAG AGATTTATAT TTAG
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Protein sequence | MTTEEQISRT PFPNSKKVYI DGEIHPIKVA MREITLNDTK LSNGGIEKNP PVTVYDTSGP YTDPNVEIDI RKGLPRLREK WILDRNDVEI LSEITSDYGQ SRLKDESLNH LRFEYLHQPK RAKKGANVTQ LYYAKQGIIT PEMEYIAIRE NQRIELLNEQ TKAMQCQHSG ESFGANTPKS KITPEFVRSE VACGRAIIPN NINHPESEPM IVGRNFLVKI NANIGNSAVT SSIEEEVEKA VWACRWGADT IMDLSTGKNI HETREWIIRN SPVPIGTVPI YQALEKVKGV AEDLTWEIFR DTLIEQAEQG VSYFTIHAGV LLRYIHLTAN RVTGIVSRGG SIMAKWCLFH HKENFLYTHF EEICEIMKQY DVAFSLGDGL RPGSIADAND AAQFAELETL GELTKIAWKH DVQVFIEGPG HVPMHMIKEN MEKQLEHCHE APFYTLGPLT TDIAPGYDHI TSAIGAAMIG WYGCAMLCYV TPKEHLGLPN KKDVKDGVIT YKISAHAADL AKGHPGAQYR DNALSKARFE FRWEDQFNLA LDPDTAREFH DETLPADGAK VAHFCSMCGP KFCSMKISQE IRDVAAAEKG MQEKSEEFIE QGKEIYI
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