| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1567 |
|---|
| Symbol | |
|---|
| ID | 5092671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 1820251 |
|---|
| End bp | 1822482 |
|---|
| Gene Length | 2232 bp |
|---|
| Protein Length | 743 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644740974 |
|---|
| Product | glycoside hydrolase family 3 protein |
|---|
| Protein accession | YP_001193918 |
|---|
| Protein GI | 146299327 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.599534 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TAACCACAAT TACTCTGTTT ATGCTTTCGC TTTTTGCGTC GGCACAGCAG
CAAACAATAG ATCAAAAAGT AAATGATCTG TTGAAAAAAA TGACTATTGA AGAAAAAATA
GGCCAGCTAA ACCAATACAC TGGAGACAAT CAGGCGACAG GTCCAATTAC TATTAACCCA
AACAAACAAT CTGAAATCAA AGCCGGGTTA ATTGGTTCGA TGCTGAACAT CATCGGAACA
AAATATACCA GACAATATCA GGAACTGGCA ATGCAGTCAA GATTAAAAAT TCCGTTGTTA
TTTGGTCAGG ATGTTATTCA CGGATACAAA ACTACTTTTC CTCTGCCTTT AGCCGAAGCT
GCCAGCTGGG ATTTACAGGC AATTGAATTA GCGGCAAGAG TGGCTGCAAC AGAAGCTTCT
GCAAGCGGTA TTCACTGGAC ATTTGCTCCA ATGGTCGACA TCAGCCGTGA TCCAAGATGG
GGACGTGTAA TGGAAGGTGC AGGAGAAGAT ACTTATCTAG GTTCTAAAAT TGCCTATGCA
AGAGTAAAAG GTTTTCAGGG AAATAAATTA GGAGATCTAA ATTCTGTAAT GGCATGCGTA
AAACACTTCG CAGCTTATGG AGCTGGAGTT GGCGGAAGAG ATTACAATTC TGTTGATATG
AGCGAAAGAA TGCTTTGGGA AACTTATTTA CCGCCTTTTA AAGCAGCTTT AGACGCTGGT
GCAGCAACAT TCATGAATTC ATTTAATGAT ATTAACGGAA TTCCTGCAAC TGGAAATGCA
CATTTACAAC GTGATATTTT AAAAGGAAAA TGGAACTTTC AGGGATTTGT AGTTTCTGAC
TGGGGTTCTA TTGGCGAAAT GGTAGCGCAC GGTTATTCAA AAAACCTAAA AGAAGCCGCA
TACTCAGCTA TTACAGCCGG AAGCGATATG GATATGGAAA GTAATGCTTA CCGTTATAAT
CTGGCACAAT TAGTTAAAGA AGGAAGAGTT TCTGTTGATT TAATTGATGA TGCTGTAAAA
CGTATTCTTC GCAAGAAATT TGAATTAGGT TTATTCGATG ATCCTTACAG ATATTCTGAT
GAGAAGAGAG CAGAAAAAGC TTTAAACAAT CCGGAACACA GAAAGGCTGC TCTTGATGTT
GCTCAAAAAA GTATTGTTTT ATTAAAGAAT GAAAACCAGA CTTTACCAAT ATCTAAAAGC
GTAAAAACGA TTGCTTTCAT TGGACCTATG GTAAAAGAAT ACAAAGAAAA CATGGGATTC
TGGTCTGTAG AACTTCCTGA AGTTGACTAT AATAAATGGA TTGTTTCTCA ATGGGATGGC
TTACAGAATA AAGTTGGCAA AAACACGAAG TTATTATATG CAAAAGGGTG TGAAATAGAA
GGGACAAATA AAGATGGTTT TGCTGAAGCT GTTGAAACTG CAAAACAAGC CGATGTTGTA
ATTTTAAGTA TTGGAGAAAG ACGTGACATG AGCGGTGAGG CAAAAAGCCG AAGCGATATT
CATTTACCAG GCGTTCAGGA AGATTTAGTA AAAGCAATTC AGGCAACAGG AAAACCGGTT
GTAGTTTTAA TTAATGCTGG AAGACCTCTT GTTTTTAACT GGACTGCAGA TAATGTTCCG
GCAGTGGTAT ACACTTGGTG GTTAGGAACC GAAGCTGGAA ATGCAATTGC TAATGTTTTA
TTTGGAGATT ATAATCCGTC AGGGAAATTA CCAATGACTT TTCCTAGAGA AGTAGGACAA
ATTCCTATTT ACTACAATCA TTTTAGTACA GGAAGACCAG CTAAAACAGA AAACGAAACC
AATTATGTTT CGGCGTATAT CGATTTAAAA AACTCACCTA AATTTCCTTT CGGATACGGT
TTGAGCTATA CACAATTTAG TTATTCTGAT TTGAAACTTT CTTCAACAAA AATAAAAAGC
AATGAAACCA TTAAAGTTTC ATTTAAACTT TCAAATGTTG GAAAAGTGGC AGGAGAAGAA
GTAGCACAAT TGTATTTAAA AGACAAATTT GGATCAGTGG TGCGTCCGGT TTTAGAATTA
AGAGATTTCG AAAAAGTGAA ATTAAATGCG GGTGAATCTA AAACTATTGA ATTTACAATT
GACAAAGAAA AACTTTCATT CTATAACGAT AAACTAGAAT GGACAACAGA ACCTGGAGAT
TTTGAACTTA TGATTGGTTC TTCATCTGCA GATATTAAAT TAAGATCAGA TTTTGAATTA
CTTGAAAAGT AA
|
|---|
| Protein sequence | MKKVTTITLF MLSLFASAQQ QTIDQKVNDL LKKMTIEEKI GQLNQYTGDN QATGPITINP
NKQSEIKAGL IGSMLNIIGT KYTRQYQELA MQSRLKIPLL FGQDVIHGYK TTFPLPLAEA
ASWDLQAIEL AARVAATEAS ASGIHWTFAP MVDISRDPRW GRVMEGAGED TYLGSKIAYA
RVKGFQGNKL GDLNSVMACV KHFAAYGAGV GGRDYNSVDM SERMLWETYL PPFKAALDAG
AATFMNSFND INGIPATGNA HLQRDILKGK WNFQGFVVSD WGSIGEMVAH GYSKNLKEAA
YSAITAGSDM DMESNAYRYN LAQLVKEGRV SVDLIDDAVK RILRKKFELG LFDDPYRYSD
EKRAEKALNN PEHRKAALDV AQKSIVLLKN ENQTLPISKS VKTIAFIGPM VKEYKENMGF
WSVELPEVDY NKWIVSQWDG LQNKVGKNTK LLYAKGCEIE GTNKDGFAEA VETAKQADVV
ILSIGERRDM SGEAKSRSDI HLPGVQEDLV KAIQATGKPV VVLINAGRPL VFNWTADNVP
AVVYTWWLGT EAGNAIANVL FGDYNPSGKL PMTFPREVGQ IPIYYNHFST GRPAKTENET
NYVSAYIDLK NSPKFPFGYG LSYTQFSYSD LKLSSTKIKS NETIKVSFKL SNVGKVAGEE
VAQLYLKDKF GSVVRPVLEL RDFEKVKLNA GESKTIEFTI DKEKLSFYND KLEWTTEPGD
FELMIGSSSA DIKLRSDFEL LEK
|
|---|
| |