Gene Fjoh_1564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1564 
Symbol 
ID5092668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1815530 
End bp1817797 
Gene Length2268 bp 
Protein Length755 aa 
Translation table11 
GC content34% 
IMG OID644740971 
Productglycoside hydrolase family 3 protein 
Protein accessionYP_001193915 
Protein GI146299324 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.180056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA GTATTTTTTG TGCGCTTATG TTCCTTTTTT GCGGAGCAGT CTGGAGCCAG 
CAGGTTAAAA ATAATAAAGC AGAAATTGAT GCTAAAGTTT CTGAATTATT ATCAAAAATG
ACGCTTGAAG AAAAAGTGGG ACAAATGACC CAAATTACAG TAACAATTTT TGAAGATGCT
AAAAAACCGG GATATTTTGA TGCTGCAAAA TTAAAGCAGG GAATTCAGGA TTATCATATT
GGTTCTATAT TAAATGTACC CAATCCGGGA GCTCCAACTT TAAAAAGATG GCAGGAAACT
ATGCAGGCCA TTACAATTGA GGCAAATAAA ACAAGGCTAA AAATTCCTGT GCTATACGGT
ATCGATGCTA TTCACGGAGC AAGTTATACA GCTGGTGCAA CATTATTTCC TCAGCAAATA
GGTTTGGCAG CAACTTTTAA TACCGATTTA GTAAAACGAG GAGCAGCTAT TTCAGCTTAT
GAAACAAGAG CTTCTTCAAT TCCGTGGGTT TTCTCGCCAG ATTTAGATTT TCCAAGAAAT
CCAGCCTGGT CAAGAATGTG GGAATCATTT GGAGAAGACG CCTATTTATC ATCAAAAATG
GCAGTAGCTT TAGTTGATGG ATTTGAAGGA AATAACAATG TAGGTTCTAA ATACAGCGTA
GCTTCCTGCA TGAAACATTA CATAGGCTAC GGAAGCACTA CGACAGGAAA AGACAGAACA
CCAAGCATTA TTCCGGAAAG ACTTTTAAGA CAATATGACT TAACGATTTA TCAGGCAGCT
ATTAATGCAG GTGCAAAAAG CGTAATGGTA AGCTCAGGAG AAATCAACGG AACTCCAGTT
CATGCAAGCA AACACTTAAT TACTGATATC CTTAAAAAAG AATTAGGTTT CTCTGGCGTT
GTCGTTACTG ACTGGAAAGA TATCATTTAT CTGTACACAA GACACAAAGT TGCCGAATCG
AAACGTGATG CTGTTCGAAT TGCTGTTATG GCCGGAATCG ATATGAGTAT GGTTCCTGAA
GAATTTTCTT TTTATACTGA TTTATTAGAT TTAGTTAAAA AAGGAGAAGT ACCAGTATCA
AGAATCGATG ATGCCGTTTC GAGAATCTTA AAAATGAAAT TTGAACTGAA TTTGTTTCAA
AATACGGTAG CAGATTTAAA AGATTATCCA AAATTTGGAT CAGCAGAGCA TATCGAAGAA
GCTTATAATA CTGCCGCAGA ATCGATTACT TTATTAAAAA ACAACGCATC AGTTCTGCCA
TTAAGTAAAA ACGAAAAAGT TTTGGTTACA GGTGCAACTG CCAATAGTAT GAAATACCTT
AACGGAGGCT GGTCATATAC CTGGCAGGGC GAAAACTCAG ATACTTATGC AGCTGATAAA
TTCACCATTT TAGAAGCTTT TCAAAATAAA TTAGGTAAAG AAAATGTATT ATATACAGCT
GGTGCAGATC TTGAAAAAGA AGACGATGCA GAAATTCAGA AAGCAGTAGA ATTGGCAAAA
AACGCTTCTA AAATCGTTTT ATGCTTAGGA GAAAAAAACT ATACAGAAAC TCCGGGCGAT
ATCAGCGATC TTTATATGAG TGCTTCTCAA ATAAAACTAG CTTTAGCTTT AGCAAAAGTA
AATAAGCCGA TTATTTTAGT TTTAAATGAA GGAAGACCAA GATTAATAAG CAATTTTGAA
GACAAAATGA GCGCTGTTGT TCAATGTTAT CTTCCGGGAA ATGAAGGAGC AAGAGCCTTA
GTTGATATTT TATACGGAGA CGTAAATCCA AGTGGAAGAC TGCCTTATAA TTATCCTAGA
TATCCCAACT CTTTAGAAAA ATACAATAGA AAATATACAG AAAGTATTTC TGAAGGAGAA
CAGAATAATG ACGCCAAATA CGAGAAAAGT TATTCTCCTC AGTTTGAATT TGGAACCGGA
TTATCGTATA CCACTTTTGT TTATTCAAAT CTAAAAATTG ATAAAACAGA AATCAATAAT
ACAGATGAAG TAAATGTTTC GGTAGATGTT ACAAATTCAG GAACGAGAGC AGGAAAAGAA
TCCGTTTTAT TGTATTTGTC TGATAACGTT GCAAGTATTA CACCTGAATT TAAATCTTTA
AAAAGATTTG AAAAGATAAG TTTAAAACCA AATGAAACTC AAACAGTAAA ATTCACTTTA
AAACAAAAAG ATCTTCAATT TGTAAACGAA GATTTAAAAT GGATTTCTGA AAAAGGATCT
TTTACTGTTC AGATAGGAGA TCAAAAAAAA GATTTTCTGT TGAAATAA
 
Protein sequence
MKNSIFCALM FLFCGAVWSQ QVKNNKAEID AKVSELLSKM TLEEKVGQMT QITVTIFEDA 
KKPGYFDAAK LKQGIQDYHI GSILNVPNPG APTLKRWQET MQAITIEANK TRLKIPVLYG
IDAIHGASYT AGATLFPQQI GLAATFNTDL VKRGAAISAY ETRASSIPWV FSPDLDFPRN
PAWSRMWESF GEDAYLSSKM AVALVDGFEG NNNVGSKYSV ASCMKHYIGY GSTTTGKDRT
PSIIPERLLR QYDLTIYQAA INAGAKSVMV SSGEINGTPV HASKHLITDI LKKELGFSGV
VVTDWKDIIY LYTRHKVAES KRDAVRIAVM AGIDMSMVPE EFSFYTDLLD LVKKGEVPVS
RIDDAVSRIL KMKFELNLFQ NTVADLKDYP KFGSAEHIEE AYNTAAESIT LLKNNASVLP
LSKNEKVLVT GATANSMKYL NGGWSYTWQG ENSDTYAADK FTILEAFQNK LGKENVLYTA
GADLEKEDDA EIQKAVELAK NASKIVLCLG EKNYTETPGD ISDLYMSASQ IKLALALAKV
NKPIILVLNE GRPRLISNFE DKMSAVVQCY LPGNEGARAL VDILYGDVNP SGRLPYNYPR
YPNSLEKYNR KYTESISEGE QNNDAKYEKS YSPQFEFGTG LSYTTFVYSN LKIDKTEINN
TDEVNVSVDV TNSGTRAGKE SVLLYLSDNV ASITPEFKSL KRFEKISLKP NETQTVKFTL
KQKDLQFVNE DLKWISEKGS FTVQIGDQKK DFLLK