| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1562 |
|---|
| Symbol | |
|---|
| ID | 5092666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 1812535 |
|---|
| End bp | 1813998 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644740969 |
|---|
| Product | glycoside hydrolase family protein |
|---|
| Protein accession | YP_001193913 |
|---|
| Protein GI | 146299322 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5520] O-Glycosyl hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TGAAATTTAT TATCACAACT TGTTTATGTT TCTCTTTATC TGTTTTTTCA
CAAACAAACC CAAAAAAGCA GGTACAGAAA TTTACAACAG CCAACAAAAA AATAACTGTT
TATACTACTG CAGCAGATAC GAATCTTAAA CTAACTGCTA CAGACAACTT AAGTTTTACA
GCGTCGAAAC AACCTGTTGA AACCGAAATA TCAGTTTTTG TAGAACCTTC AAAAAAGTTT
CAAACCTTTA TGGGGATTGG AGGTGCTGTA ACAGATGCCA GTGCTGAGAT CTTTGCTAAA
TTATCAAAAG AAAAACAAAC CGAATTTTTA AATGCTTATT ACGATGCTCA AAAAGGAATT
GGGTATTCAT TGCTAAGAAC AACGATTCAA AGCTCTGATT TTAGCAGTGG AAGCTATTCT
TACATCGAAG AAGGAGATAA AGATTTAAAA ACGTTTTCAA TTGATCATGA TAGAAAATAC
AGAATCCCAT TAATTAAAGA TGTTATAAAA ACTGCAGGAG GAAAGCTACT GACTTACGCT
ACGCCCTGGT CACCAAATGC ATTCATGAAA AGTAATAAAA GCGTACTTAA GGGCGGAAAA
TTACTTCCGG AATATTTCCA GCCATGGGCA AATTTTTACG CAAAATTTAT AAAAGCATAT
AATAAAGAAG GTATTCCAAT CTGGGGGACA TCGGTGCAAA ATGAACCAAT GGCAACACAG
ACTTGGGAAT CTTGTTTATA TACTGCAGAA GAAGAAAGAG ATTATATAAA AAACTACTTA
GGGCCAACAC TTAAAAAAGA AGGACTTGGA GATGTAAAAA TTATTGCATG GGATCATAAC
AGAGATTTAA TGGTACAGAG AGCCAATGTT ATTTTCTCAG ATCCGGAAGC TTCAAAATAT
GTATGGGGAT TAGGTTTTCA TTGGTATGAA ACCTGGACAG GTGCACAGCC AATGTTTGAA
AACGTTGCCA GAGTGCACGA AGCTTATCCT GATAAAAAAC TAATGTTTAC CGAAGGATGT
GTCGAAAGAT TTGATGCGGC AAAATACCAA TTTTGGCCAA ATGCAGAACG ATACGGAACT
TCTATGATAA ACGATTTTAA TAACGGAACT GTTGCATGGA CTGACTGGAA TATCCTTTTA
GATCAATTTG GCGGGCCAAA TCACGTTGGT AATTTCTGTT TTGCTCCAAT TCATGCTGAT
ACTGTTACAG GAGAATTAAT TTACACACCA TCTTATTATT ACATTGGACA TTTTTCAAAA
TTCATTCGCC CAAATGCAGT TCGTGTAAGT TCTTCAGTAA GCAGAAGCTA TTTATTGAGC
ACGTCATTTT TAAATACCGA TGGCAAAATG GCAACTATTG TTATGAATCA TACCGATAAT
GAAATTACAT ACAATTTTAT TATTGCTGAG GAAAAAGCAA TTGTAAAAAT TCCTGCTCAT
GCAATCCAGA CACTAGTATA TTAA
|
|---|
| Protein sequence | MKKMKFIITT CLCFSLSVFS QTNPKKQVQK FTTANKKITV YTTAADTNLK LTATDNLSFT
ASKQPVETEI SVFVEPSKKF QTFMGIGGAV TDASAEIFAK LSKEKQTEFL NAYYDAQKGI
GYSLLRTTIQ SSDFSSGSYS YIEEGDKDLK TFSIDHDRKY RIPLIKDVIK TAGGKLLTYA
TPWSPNAFMK SNKSVLKGGK LLPEYFQPWA NFYAKFIKAY NKEGIPIWGT SVQNEPMATQ
TWESCLYTAE EERDYIKNYL GPTLKKEGLG DVKIIAWDHN RDLMVQRANV IFSDPEASKY
VWGLGFHWYE TWTGAQPMFE NVARVHEAYP DKKLMFTEGC VERFDAAKYQ FWPNAERYGT
SMINDFNNGT VAWTDWNILL DQFGGPNHVG NFCFAPIHAD TVTGELIYTP SYYYIGHFSK
FIRPNAVRVS SSVSRSYLLS TSFLNTDGKM ATIVMNHTDN EITYNFIIAE EKAIVKIPAH
AIQTLVY
|
|---|
| |