Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1560 |
Symbol | |
ID | 5092664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 1807610 |
End bp | 1810759 |
Gene Length | 3150 bp |
Protein Length | 1049 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644740967 |
Product | TonB-dependent receptor |
Protein accession | YP_001193911 |
Protein GI | 146299320 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAA CAAAATTACT TATCTTTTGT GTTTCATCTC TATTGTTCTC AGTTATCGCA ATGGCACAGG ATGTTACGGT AACCGGAACT ATTAATGATG AAAGTGGAAT GCCCGTCCCG GGAGCAACAG TTTTAATTAA AGGAACAAAT AAAGCTACAG CTTCTGACTT TGATGGAAAA TTTCAGATCA ATGTTCCTTC TAATGGAACT TTAACAATTA GTTTTGTTGG ATACGTTACT GTACAGGAAG CAGTAAATGG AAGAAACAAA ATAAGTGTAA AACTTCAGCC GGAATCTCAA AACTTAAATG AAGTTGTTGT TGTAGGATAC GGAGTTCAAA AGAAAAGCGT TGTTACAGGA GCAATTTCTA GTGTAAAAGG AAAGGATTTA GAAAATCTTC CAATTACCAG AATTGAGCAG TCTTTACAAG GTAGAGTTTC TGGGGTTTCT ATTGCAGCAA ATGCTGGTCA GCCAGGTTCT GCTTCTACAA TTAGAATTCG TGGATTTACT ACATTAAACA ATAATGATCC TCTATGGGTT GTTGATGGTG TTGTGGTAGA CAACGGTGGT ATTGGTTATT TGAATCAATC AGATATTGAA TCAATCGAGG TTTTAAAAGA CGGTGCTTCT GGAGCTATTT ATGGTTCTCG TGCAGCAGCA GGGGTTATCA TTGTTACTAC TAAAAAAGGT AAAGCAGGAA AAATTTCTGT AAACTATACT GGATTTGCAG GTACATCTCA GGCAGCAAAG AAGATCGATT TATTAGATGC TTCTCAATAT GTAACAATCA TGAACGAAGC GTATACTAAT GGAGGTAAAG CGCCATTGTT TCCAACTGTT AATGGAAGCG GCCAGCCTAT AAATTATGGA AAAGGTACAA ATTGGCAGGA TGCTATTTTT AACAATCATG CACAGCGTTA TTCTCACGAA TTAAGCTTCA GCGGAGGTAA TGATGTTTCT ACATTCTATA TGTCTTTTGG TATTACAGAT CAGGAAGGTA TTGTTACTAC AGATATTTCT AATTACACAA GAAAAAATAT CCGATTAAAC TCTAATCATA AAATTGGAAA ATTCATTAAA GTTGGTCAGA CTTTAGGATA TTCTAATGAA AAAACGATCG GAATTGGTAA TACAAATGAC GAATTTGGAG GACCGTTAGC ATCTGCAATC AACTTAGATC CGTTGACTCC AGTTATTGAA ACTGATCCTT CTAAAACAGG TCCAGGTTCA ATTTATGCTA ATCCAAATAC TCTAAAAGAT GCAAATGGTC ATTACTATGG TATTTCTACT ATTGTAACAC AGGAAAACAC AAACCCATTA GCATACACGC AGACAAGATT AGGAAATAAT GATTTTGCAG AAAATTTTGT TGGTAATGTT TTTATTGAAG CAGAGTTATT GCCAGGTTTA AAATTTAAAT CTTCTGCTGG TGCAAAATTA GCTTATTATG GTTCTGACAA TTTTACTCCA GTTTTCTACT TAAACGGAGC TACAAAAAGA GATAAAAATG AATTGTTCAG ATCATACAAA AAATCATTCA GCTGGAACTG GGAAAACACT TTAAATTATA CTAAGAAATT TGGTGATCAC AATTTCAGTA TCTTAATTGG TAAAGGTACT TATGTAGATG GTATTACATC AGGTAACGAT GCTACTTACC AAGGAATTCC AGCAACTACT CATGACGAAG CTTCTTTCAA TGTAGATATC CCATTGGCTG ATAAATTTGT TAATGCTTAT AATTCAACAG CAGTTGAGCA CAGAGTAGAG TCTTTATTCT CAAGATTAAA TTACGATTAT AAAGAAAAAT ATATTTTTAC AGGTATTATT CGTCGTGATG GTTCTACACG ATTTGGACCA AACCACAAAT ACGGAACTTT CCCTTCAGTA TCTCTTGGAT GGGTACCATC TAAAGAAGGA TTCTGGAAAG AAAATAATGT TGTAACTAGT TTAAAAATTA GAGGAGGTTA TGGTGTAACA GGAAATGACT CTTCTCCTGA TTTCTTATAC CTTTCAACTA TTGGTAACAA AAGAAATTAT ACTATTGGAG GAACACCAGT TCCAGGACAA AGCCCTAACG CTATTCCAAA CCCTGATTTG AAATGGGAAG AAACTAAACA AGCAAACATT GGTTTTGAAA GTACACTTTT CCACGACTTC AATTTAAGTG TTGACTTATT TAACAAAAAG ACATCAGGTA TCTTAATGAA AGTGCCAATT CCTGGATATG TTGGAGCAAG TGGTGATACT TATGCCAACT TAGCAGATAT GGAAAATAGA GGTGTTGATA TTGAATTAGG ATATCGTAAA AAAATTGGTG CATTGAATCT TTCTGTAAAC GGAAACTTCT CTTACATCAA AAATGAAATC ACTTATATTG ATAAAGGAGT GAATTTTATT GCAGGAGATG AAACAGTACA ATCGACTTCT TACGAAATCA ACAGAACTCA GGTTGGTCAG GCTTATAACT CATTTTACGG ATTTAAAACA AACGGTATTT TCCAGACTCA GGCAGATATC GATAATTACA AAAATGCAGC AGGTGTAGTA ATCCAGCCAA ATGCTAAACC AGGAGATTTC CGTTGGCAGG ATTTAAACGG AGATGGTAAA ATTGACGGTA ACGATAGAGA TTTCTTAGGA ACTTCATTAC CTAAATTTAC TTACGGTTTA ACTTTAAACT TAGACTATAA AGGATTTGAT TTATTAGTTT TTGGTCAGGG AGCTGGCGGA AACATGATTT ATCAAGGATT ACGAAGATTA GATATTACAA ATGCGAACTA CCAGACAGAA GTTTTAGGTC GTTGGACAGG ACCAGGATCA ACAAATTCTT ATCCTAGAGT TACTGTTGAC GATACAAACA AAAACTTTAG TAATCCATCT GATTTTAATT TACAAAAAGG TGATTTCTTC AGATTCAAAA CAATTCAGTT TGGATATTCA TTCCCACAAG AATGGATAAA CAGTATTTCA TTAACAAAAG TAAGACTGTA CCTAACTGGA GAAAACTTGT TTACGATTAC AAAATACACT GGTTTTGATC CAGAAATTGG AGGACCTACT ACAGCTGGAA TGAACAATGT ACAAGGTGTT GACAGAGGAT ACTATCCTCA GGCAAAATCG TACATGTTAG GAGTTAATTT GCAATTTTAA
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Protein sequence | MKLTKLLIFC VSSLLFSVIA MAQDVTVTGT INDESGMPVP GATVLIKGTN KATASDFDGK FQINVPSNGT LTISFVGYVT VQEAVNGRNK ISVKLQPESQ NLNEVVVVGY GVQKKSVVTG AISSVKGKDL ENLPITRIEQ SLQGRVSGVS IAANAGQPGS ASTIRIRGFT TLNNNDPLWV VDGVVVDNGG IGYLNQSDIE SIEVLKDGAS GAIYGSRAAA GVIIVTTKKG KAGKISVNYT GFAGTSQAAK KIDLLDASQY VTIMNEAYTN GGKAPLFPTV NGSGQPINYG KGTNWQDAIF NNHAQRYSHE LSFSGGNDVS TFYMSFGITD QEGIVTTDIS NYTRKNIRLN SNHKIGKFIK VGQTLGYSNE KTIGIGNTND EFGGPLASAI NLDPLTPVIE TDPSKTGPGS IYANPNTLKD ANGHYYGIST IVTQENTNPL AYTQTRLGNN DFAENFVGNV FIEAELLPGL KFKSSAGAKL AYYGSDNFTP VFYLNGATKR DKNELFRSYK KSFSWNWENT LNYTKKFGDH NFSILIGKGT YVDGITSGND ATYQGIPATT HDEASFNVDI PLADKFVNAY NSTAVEHRVE SLFSRLNYDY KEKYIFTGII RRDGSTRFGP NHKYGTFPSV SLGWVPSKEG FWKENNVVTS LKIRGGYGVT GNDSSPDFLY LSTIGNKRNY TIGGTPVPGQ SPNAIPNPDL KWEETKQANI GFESTLFHDF NLSVDLFNKK TSGILMKVPI PGYVGASGDT YANLADMENR GVDIELGYRK KIGALNLSVN GNFSYIKNEI TYIDKGVNFI AGDETVQSTS YEINRTQVGQ AYNSFYGFKT NGIFQTQADI DNYKNAAGVV IQPNAKPGDF RWQDLNGDGK IDGNDRDFLG TSLPKFTYGL TLNLDYKGFD LLVFGQGAGG NMIYQGLRRL DITNANYQTE VLGRWTGPGS TNSYPRVTVD DTNKNFSNPS DFNLQKGDFF RFKTIQFGYS FPQEWINSIS LTKVRLYLTG ENLFTITKYT GFDPEIGGPT TAGMNNVQGV DRGYYPQAKS YMLGVNLQF
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