| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1558 |
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| Symbol | |
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| ID | 5092662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 1803065 |
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| End bp | 1804351 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 644740965 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001193909 |
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| Protein GI | 146299318 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATTC AGGAAATTCA TAACTTGTTT TTGAAATGCC AATCTCTTTC AATTGATACA
AGAAAAATTG AAAAAGGTTC TATGTTTTTT GCCATAAAAG GTGAAAATTT TGATGCAAAT
ACTTTTGCTA AAGAAGCACT GGATTTAGGT GCATTATACG TTGTTATAGA TAACGAATCT
TATTTTATTG ACGACAGAAC TATCTTAGTT AATAACAGCT TAGAAACACT GCAGGAACTG
TCGAAATTTC ATCGTAATTA TTTAAAACTT CCAATTGTTG CACTTACAGG AAGCAATGGT
AAAACAACAA CGAAAGAGCT TATTAATGTT GTTTTGTCTA AGAAGTTTAA AACAAAAGCC
ACTATTGGAA ATCTGAATAA TCACATAGGT GTTCCGTTAA CGCTGCTTTC TTTTACAAAA
GAAACTGAAA TTGGAATCGT AGAGATGGGA GCTAATCATA AAAAAGAAAT AGAATTTTTA
TGTGAAATTG CCCAGCCGGA TTATGGCTAT ATAACTAATT TCGGGAAAGC CCATTTAGAA
GGTTTTGGCG GCGTGCAGGG CGTTATTGAA GGGAAAAGTG AAATGTATCA ATATTTGTTA
AAAAACAATA AAACTGTTTT TGTAAATCTT GAAGATCCGA TTCAGATAGA AAAATCAACC
GGAATTAAAA ACTTTACTTT TGGTGTAAAC AAAGAATCTG CCGATTTAAA GATTAAAAAC
ATTCAGGCAA ATCCTTTTGT GGTTATAGAA TATGAAGATT TTAAAGTAGA ATCGCATTTA
ATCGGGCTTT ATAATGCGAA TAACATCAAT GCAGCAGTTT CGATAGGGAA ATATTTCAAT
GTAGAAGATG CTTTAATAAA AGAAGCTATC GAGAATTATA TTCCGGCAAA TAATAGGTCT
CAATTGCTAA AAAAAGGTTC AAATGAGATT ATTTTAGATG CATATAATGC AAATCCAAGC
AGTATGGCTG TGGCGATTAC TAATTTTCTG CAATTAGAAA ATCAAAATAA AATAATGATT
CTGGGTGATA TGTTTGAACT TGGAAATGAA AGCCATGAAG AACATAAAGC TATTGTAGAT
TCTCTGTCTA ACCAGAATAA ATCAAAATGT TATTTGATTG GAAAATCATT TTATGAAAAT
AAGATTTCGA ATGAAAATAT TCAATTTTAT GAAACATTTG ATGCTTTCGC AGCTTATCTA
AAAACAATTG AATTTAAAGA TAATACGATT TTGATAAAGG GCTCCAGAGG AATGGCTTTG
GAACGCACTT TAGATTATAT CTCATAA
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| Protein sequence | MNIQEIHNLF LKCQSLSIDT RKIEKGSMFF AIKGENFDAN TFAKEALDLG ALYVVIDNES
YFIDDRTILV NNSLETLQEL SKFHRNYLKL PIVALTGSNG KTTTKELINV VLSKKFKTKA
TIGNLNNHIG VPLTLLSFTK ETEIGIVEMG ANHKKEIEFL CEIAQPDYGY ITNFGKAHLE
GFGGVQGVIE GKSEMYQYLL KNNKTVFVNL EDPIQIEKST GIKNFTFGVN KESADLKIKN
IQANPFVVIE YEDFKVESHL IGLYNANNIN AAVSIGKYFN VEDALIKEAI ENYIPANNRS
QLLKKGSNEI ILDAYNANPS SMAVAITNFL QLENQNKIMI LGDMFELGNE SHEEHKAIVD
SLSNQNKSKC YLIGKSFYEN KISNENIQFY ETFDAFAAYL KTIEFKDNTI LIKGSRGMAL
ERTLDYIS
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