| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1530 |
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| Symbol | |
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| ID | 5091276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 1768494 |
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| End bp | 1770788 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644740937 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_001193881 |
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| Protein GI | 146299290 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCTTGC TGATTTACTA TTTTTCAATA CCTCGAACTT TGTTCAAAGA ACCGTATTCA
ACCGTTATTG AAAGTAAAGA AGGAGAACTT CTTGGCGCTA AAATTGCGCG CGACGGACAA
TGGCGTTTTC CGGCGCAGGA CAGTGTTCCA GATAAATTCA AGAAATGTAT CGTTTATTTT
GAAGATGAAT ACTTCTACAA ACATCCCGGC TTCAATCCCG GCGCGATGAT TAATGCTTTT
AAGCAAAACA GAAAAGCAGG TAAAGTTGTT CGAGGCGGAA GTACGTTAAC ACAACAAGTT
ATTCGATTAT CAAGAAAAGG AAAAAACAGG ACCTACTTTG AAAAACTAAT AGAAATTATT
CTCGCTACAA GATTAGAATT AGGTTATTCT AAGAATGAAA TTCTCGAAAT GTATGCAGCG
CACGCTCCTT TTGGAGGAAA TGTTGTGGGA TTGGAAATGG CTTCATGGCG TTATTTTGGA
GTACAATCGA ATCAATTATC TTGGGCAGAA AATGCAGTTT TGGCTGTTTT ACCCAATGCA
CCAAGTTTAA TTTATCCTGG AAAAAATCAG ATAAAATTAC TCAACAAACG AAATCGTCTT
TTATTAAAAC TGCATCAGGA AGGCATAATC GATAAACAGA CGTACGAACT TTCGATAGAA
GAACCATTGC CTCAAAAACC GTATGATCTG CCTCAAATAG CGCCTCATTT ATTACAGAGA
GTGGCAAAAA ATGAAGAAGG AACAAGAGTA AAAACTACAA TTGATTATGC GTTGCAAAAT
CGTGTCAACC AAATCGCGAG ATATTATTAC AATCAGTATA AGCAGAATGA AGTGCATAAT
CTGGCTATTT TGGTAATCGA TGTTCAGAAT CGAAATGTAA TAAGTTATGT AGGGAATTCT
CCAACAGATA AAGACCATCA AAAAGATGTT GATATTATTG ATGCGCCACG AAGTACAGGC
AGTATTTTAA AACCGCTTTT GTACGGAGCA ATGTTGGATG ACGGCGAATT ATTGCCCAAT
ACTTTAGTGG CTGATATTCC AACGCAGATT TCAGGATATA CGCCTCAAAA TTTCAACCTA
ACATTTGATG GGGCAGTTCC AGCTCATCGT GCATTGTCGC GTTCGTTGAA TATTCCTGCG
GTTTTAATGC TTCAGGAATT TACGGTAAAC AAGTTTTACG AAGAGCTTCA AAAATTCAAG
TTAAAGAATA TTAATAAAAC GCCGGATCAT TATGGTTTGT CGCTTATTTT GGGTGGTGCA
GAAAGTAATT TATGGGATTT ATGCCGAACA TACGCAAATC TTTCATCTAC GGTCAATTAT
TATACTAAAA ATAAAGGGCA ATATAGAACC AACGAGTTCA CAGAGCTGAA TTACAAAAAC
GATTTTAAGC CTGATTTTGG TTCTGAAACT GATCAAAAGA ATATTTTGGG CGCAGGATCA
ATTTGGTTAA CCTACAACGC AATGGAAGAG GTTAATAGGC CTGAAGGAGA CGAAGCTTGG
AAGTTTTATG ACAGTTCTTT AAAAATTGCA TGGAAAACGG GAACAAGTTT TGGAAATCGA
GATGCATGGG CTATTGGAAC AAATTCAAGA TATGTAGTTG GAATTTGGGT TGGAAATGCG
ACGGGAGAGG GAAGGCCAAC TTTGACAGGA GTAACCAGTG CTGCGCCAAT TTTATTTGAT
GTTTTTAATT TACTGCCAAG ACAACGATGG TTTGATACGC CGTATAATGA TTTGTCCGAA
GTTGAGGTTT GTCGTTTAAG CGGTTATTTG GCAAAAGACA ACTGTCCGAA AATTAAACAA
TGGGTTACTA AAAAAGGTAA ATCGACCAAG GTCTGTCCGT ATCACAGAAC AATTCATTTA
GATAAAACAG AGCAGTTTCA GGTAAACAGC AGCTGCGAGA ACATCGATAA TATTGTTACT
AAAAACTGGT TTGTACTACC TCCAGTTATG GCTTGGTATT ACAAAAGCCA GCATATCGAA
TATTTGCCGT TACCGCCATT CAAAGAAGGA TGCGAAGGAA CACAGACTAC TACAATGGAC
TTTATTTATC CGAAAGCGAA TAGTAAAATC TATTTGACAA AGGACTTTAA CAGCAACGTA
CAGCCCGTAA TTTTAAAAGT AGCGTATTCT GAAAGAGATA AAGAATTATT CTGGTATGTT
GATGATGTTT ATAAAGCAAC GACAAAAACA TTTCATGAAC TGCCTATTAC GCCAACAACA
GGAATACATT ATATCACGGT TGTAGATGCT TCTGGAAATG AAATTAGACG CAGAATCGAG
ATTGTAAGAG AATAA
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| Protein sequence | MLLLIYYFSI PRTLFKEPYS TVIESKEGEL LGAKIARDGQ WRFPAQDSVP DKFKKCIVYF
EDEYFYKHPG FNPGAMINAF KQNRKAGKVV RGGSTLTQQV IRLSRKGKNR TYFEKLIEII
LATRLELGYS KNEILEMYAA HAPFGGNVVG LEMASWRYFG VQSNQLSWAE NAVLAVLPNA
PSLIYPGKNQ IKLLNKRNRL LLKLHQEGII DKQTYELSIE EPLPQKPYDL PQIAPHLLQR
VAKNEEGTRV KTTIDYALQN RVNQIARYYY NQYKQNEVHN LAILVIDVQN RNVISYVGNS
PTDKDHQKDV DIIDAPRSTG SILKPLLYGA MLDDGELLPN TLVADIPTQI SGYTPQNFNL
TFDGAVPAHR ALSRSLNIPA VLMLQEFTVN KFYEELQKFK LKNINKTPDH YGLSLILGGA
ESNLWDLCRT YANLSSTVNY YTKNKGQYRT NEFTELNYKN DFKPDFGSET DQKNILGAGS
IWLTYNAMEE VNRPEGDEAW KFYDSSLKIA WKTGTSFGNR DAWAIGTNSR YVVGIWVGNA
TGEGRPTLTG VTSAAPILFD VFNLLPRQRW FDTPYNDLSE VEVCRLSGYL AKDNCPKIKQ
WVTKKGKSTK VCPYHRTIHL DKTEQFQVNS SCENIDNIVT KNWFVLPPVM AWYYKSQHIE
YLPLPPFKEG CEGTQTTTMD FIYPKANSKI YLTKDFNSNV QPVILKVAYS ERDKELFWYV
DDVYKATTKT FHELPITPTT GIHYITVVDA SGNEIRRRIE IVRE
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