| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1523 |
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| Symbol | |
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| ID | 5091269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 1757404 |
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| End bp | 1759191 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644740930 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_001193874 |
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| Protein GI | 146299283 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.157423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCG ATTTACTTTC CAACATATAC AATCCTGCTG ATTTACGTCT TTTAAAAGAA
GAACAGCTTA CTCAAGTGGC TCAGGAACTT CGTCAGTTTA TTATTGATGT GGTTTCGGTA
AAAGAAGGAC ATTTGGGCGC GAGTCTGGGT GTAATTGAAC TGACAATTGC ACTGCATTAT
GTTTTTAATA CTCCAGATGA TTTACTGGTT TGGGATGTTG GACATCAGGC TTATGGTCAT
AAGATCTTAA CTGAAAGAAG AGAAATTTTT CATACTAACA GACAAATCGA CGGAATTTCC
GGTTTTCCAA AAAGAACAGA AAGTGTATAC GACACGTTTG GCGTGGGACA TTCTTCTACT
TCTATTTCTG CAGCACTCGG AATGGCGATT GCCTCTAAAC TAAAAGGCGA TTTAGACAAA
CAGCACATTG CGGTTATCGG CGATGCTTCG ATTGCAAGCG GAATGGCTTT TGAAGGTCTA
AATCATGCCG GAGTTACTGA TGCTAATATT CTGGTTATTT TAAATGACAA TGCTATAGGA
ATTGACCCAA GCGTAGGTGC ATTAAAAAAG TATTTAACTG CGGTTAAAAA TGGGAAAAAT
CCAAAACAGA ACAACATTAT AAAATCTCTG AATTTTGATT ATTCGGGACC AATTGATGGT
CATGATTTTC CAACTTTAAT AAAAGAATTA AAACGTTTAA AAAAGATAAA AGGCCCTAAG
TTTCTTCATA TTGTAACTAC AAAAGGCAAA GGACTGCAGC AGGCCGAGGA AAATCAGGTT
AAGTATCATG CGCCAGGAAA ATTTGATGCT TCGACCGGAG AAATTCATTT AAAATCTGAA
GAAAATCTTC CGCCTAAATA TCAGGATGTT TTTGGTCTGA CTGTCCTGGA TTTAGCCCGA
AAAAACGAAA AAATAATTGG GATAACGCCC GCAATGCCAT CTGGAAGTTC TTTAAAATTT
ATGATGGATG AATTACCGGA TCGTGCTTTT GACGTGGGTA TTGCTGAACA GCATGCAGTA
ACTCTTGCTG CCGGAATGAC AACTCAGGGC ATGATGGTGT ATTGCACGAT TTATTCGACT
TTTTTACAGC GTGCCTATGA TCAGCTTATT CACGATGTGG CACTGCAAAA TTTACCTGTT
ATTTTTTGTC TTGACAGAGC TGGTTTGGTT GGCGAAGACG GTGCAACGCA TCATGGTGTT
TTTGATATTG CTTATCTGCG TTCGATTCCA AATATGATTA TTTATGCGCC AATTAATGAA
ATTGCGCTTC AAAATATTTT ATATACAGCT CAATTAGGTC TGAATAATCC TATCGCAATT
CGATATCCGA GAGGTCGCGG TGTTATAAAA AACTGGGAAG TAGAAAATTT CGGACAGTAT
GAAAAAATAA AAATAGGCGA AGGAAACTGC CTAAAAAATG GTACAAAAAC AGCTGTTTTA
TCTACAGGAA CGATTGGAAA TAATGTAACA GATGCTTTAG CTCAATGCGC AAATGCCGAC
ACTATTGCTC ATTATGACTT TCCGTTTATA AAACCACTGG ATATCAACTT ATTAAAAACT
ATTTTTTCTA CATTCGAAAA CATTATTACA ATAGAAGATG GAGTTAAAAA AGGAGGGTTT
GGAAGTGCTG TTTTAGAGTT TGCAGCCACA AATAATTTTA AAAACAAGGT TAAAATTTTA
GGTATTCCGG ACGAGTTTAT TGAACACGGA ACCGTGCAGC AACTGCAACA ATTGTGTAAA
ATTGACGTTA AAAGTTTAAT AAATCTTTTT TCAAACGGCA CAAAATAA
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| Protein sequence | MKSDLLSNIY NPADLRLLKE EQLTQVAQEL RQFIIDVVSV KEGHLGASLG VIELTIALHY
VFNTPDDLLV WDVGHQAYGH KILTERREIF HTNRQIDGIS GFPKRTESVY DTFGVGHSST
SISAALGMAI ASKLKGDLDK QHIAVIGDAS IASGMAFEGL NHAGVTDANI LVILNDNAIG
IDPSVGALKK YLTAVKNGKN PKQNNIIKSL NFDYSGPIDG HDFPTLIKEL KRLKKIKGPK
FLHIVTTKGK GLQQAEENQV KYHAPGKFDA STGEIHLKSE ENLPPKYQDV FGLTVLDLAR
KNEKIIGITP AMPSGSSLKF MMDELPDRAF DVGIAEQHAV TLAAGMTTQG MMVYCTIYST
FLQRAYDQLI HDVALQNLPV IFCLDRAGLV GEDGATHHGV FDIAYLRSIP NMIIYAPINE
IALQNILYTA QLGLNNPIAI RYPRGRGVIK NWEVENFGQY EKIKIGEGNC LKNGTKTAVL
STGTIGNNVT DALAQCANAD TIAHYDFPFI KPLDINLLKT IFSTFENIIT IEDGVKKGGF
GSAVLEFAAT NNFKNKVKIL GIPDEFIEHG TVQQLQQLCK IDVKSLINLF SNGTK
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