Gene Fjoh_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1516 
Symbol 
ID5091262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1749304 
End bp1750200 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content36% 
IMG OID644740923 
ProductABC transporter related 
Protein accessionYP_001193867 
Protein GI146299276 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR03522] gliding motility-associated ABC transporter ATP-binding subunit GldA 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATAG AAGTAAACAG TATATCAAAA AGTTACGGAG AGCAAAAAGC TTTAAATGAA 
ATTTCTTTTA AAATTGAGAA AGGAGAAATC GTAGGATTCC TCGGTCCAAA TGGAGCCGGA
AAATCTACTT TGATGAAAAT CCTGACCACT TATTTACTTG CCGACAGCGG CTCAGCCCTT
GTAAATGGTC ACGATGTCAT GACAAATGCA AAAGCAGTAC AGCAGTCTAT TGGTTACTTA
CCAGAGCATA ATCCGTTATA TTTGGATTTG TATGTTCGTG AGTATTTGGC TTTTAATGCC
GATGTTTATA AAGTGCCAAA GTCAAGAATT GAAGAGGTAA TCCAACTGAC AGGACTGACA
CCTGAAAGTC ATAAAAAAAT CAGCCAGCTA TCAAAAGGAT ACCGCCAGCG TGTAGGGCTT
GCAAATGCTT TGTTACATAA TCCGGATGTT TTAATTTTAG ATGAACCAAC TACAGGTCTG
GATCCGAATC AGTTAATGGA AATTCGAAAC GTAATTAAAA ATATCGGAAA AGATAAAACC
ATTTTTCTTT CGACACATAT TATGCAGGAA GTCGAAGCGA TCTGCGACCG TGTCATAATT
ATTGACAAAG GACAAATTGT AGCCGACAAT AAATTAGATC ATTTAGTTGC TGCAGACAAG
GAACAAGTTA TTGAGGTTGA GTTTGATTAT CAGATAGAAG AACAGCTTTT AGCAAAGCTT
GAAAATATTG CTTCATACAA AAATACGCAT GACATGACTT GGGAGCTAAC TTTTATTACT
GACAAAGATA TGCGTCCTGC CATTTTTGAC TTTGCCAACG AGAATGGGTT AAAAACATTA
CAATTGAATC AGAAAAACAA AAACCTCGAA GCTGTATTTA GAGAGATTAC TAAATAA
 
Protein sequence
MSIEVNSISK SYGEQKALNE ISFKIEKGEI VGFLGPNGAG KSTLMKILTT YLLADSGSAL 
VNGHDVMTNA KAVQQSIGYL PEHNPLYLDL YVREYLAFNA DVYKVPKSRI EEVIQLTGLT
PESHKKISQL SKGYRQRVGL ANALLHNPDV LILDEPTTGL DPNQLMEIRN VIKNIGKDKT
IFLSTHIMQE VEAICDRVII IDKGQIVADN KLDHLVAADK EQVIEVEFDY QIEEQLLAKL
ENIASYKNTH DMTWELTFIT DKDMRPAIFD FANENGLKTL QLNQKNKNLE AVFREITK