| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1510 |
|---|
| Symbol | |
|---|
| ID | 5091256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 1739239 |
|---|
| End bp | 1741914 |
|---|
| Gene Length | 2676 bp |
|---|
| Protein Length | 891 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644740917 |
|---|
| Product | methionine synthase |
|---|
| Protein accession | YP_001193861 |
|---|
| Protein GI | 146299270 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
|---|
| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAA AAAGAAGAGA CCTTGTATTA TCAGGATTAG AACCGTTAAT TATTACGCCG
GAAAGTGTTT TCGTGAATGT TGGTGAGCGT ACAAACGTAA CAGGTTCAAG AAAATTCTTG
AGATTAATCA AGGAAGAGAA ATATGACGAG GCGCTTGATA TTGCAAGACA ACAAGTAGAA
AGCGGGGCAC AGATCATCGA TATTAATATG GATGAAGGAA TGCTTGACGG AGTTAATGCA
ATGACTAAAT TTTTGAATTT AATTGCTGCA GAACCAGACA TTTCGAGAGT ACCGATTATG
ATCGACAGTT CGAAATGGGA AATCATTGAA GCAGGTCTAA AAGTAGTACA AGGAAAAAGC
GTTGTAAACT CGATTTCGTT AAAAGAAGGG GAAGAAGCCT TTATTCACCA CGCCAAATTA
ATCAAACGTT ACGGAGCTGC TGCTATTGTA ATGGCTTTTG ATGAAGTGGG TCAGGCCGAT
AATTACGATC GTAGAGTTGA AATTTGCCAG CGTTCGTATG ATATTTTGGT GAACAAAGTA
AATTTCCCTC CACAAGATAT TATTTTCGAT TTAAATATTT TCCCAGTTGC AACGGGAATG
GAAGAGCATA GATTGAACGC TCTGGATTTC TTTAGAGGAA CAAAATGGGT TCGTGAAAAT
CTTCCTCATG CGCACATCAG CGGTGGAGTA AGTAACGTTT CGTTCTCGTT TAGAGGGAAT
GATGTTGTTC GTGAAGCAAT GCACTCGGTG TTTTTATACC ACGCAATTAA AGAAGGAATG
ACGATGGGAA TCGTTAATCC GGAGATGTTG ACGATTTACG ATGACATTCC GAAAGATTTA
TTAGAACACG TTGAAGACGT AATTTTAGAT AGACGTGATG ATGCCACAGA ACGACTTTTG
GACTTTGCAG AAAATGTAAA AGGCGAAGCA AAGAGCGATG AAAAAGTAGT TCAGGAATGG
CGTTTTGGAA CTGTTCAGGA TCGTATTACA CATTCGTTGG TAAAAGGAAT CGATGCTTTT
ATTGAAGAAG ATGTTGAAGA AGCACGTTTG GCAGCAACAA AACCAATCGA AGTTATCGAA
ATCAATTTGA TGACGGGAAT GAATGTAGTT GGAGATTTAT TCGGAAGCGG AAAAATGTTC
CTGCCTCAGG TAGTAAAGTC GGCTCGTGTA ATGAAAAAAG CCGTGGCTTA TTTATTGCCA
TTTATCGAAG CGAGTAAACA AGCAGGGGAC AAACAAGGAA ACGGAAAAAT CTTGATGGCA
ACCGTAAAAG GTGACGTTCA CGATATTGGT AAAAACATCG TTTCTGTGGT TTTGGCTTGT
AATAATTATG AGATTGTAGA TCTTGGTGTT ATGGTGCCTC CGGAAAAAAT CATTGCAGCG
GCGATTGAAC ATGAAGTAGA TATTATTGGA TTAAGTGGAT TGATTACGCC TTCGCTTGAC
GAAATGGTTT ATTTAGCCAA AGAATTAGAC AAACAAGATA TTAAAATCCC GATTATGATT
GGAGGAGCAA CAACTTCGCG TGCACATACT GCCGTGAAAA TTGCACCTCA GTACAGAGAA
ACGGTAATTC ACGTAAACGA TGCTTCGAGA GCCGTTACCG TTGCAGGAAA TCTGTTAGAT
CATAATAGAA AAATATATGC GGCAGATATT CGTGCAGAAT ACGATTCGTT TAGAGAAACG
TTCTTAAATC GTTCGAGAGA TAAAAACTTC CTGACGATTG AAGATGCCCG CAAAAACAAA
TTGCCATTGG ATTGGTCGGA ATACACGCCA ACTAAGCCAA AAGTAATCGG TGCACAAACC
ATCGAAATTG AACTAGATGT TTTGGTTCCA TATATCGACT GGACGCCATT TTTTCAGACT
TGGGAATTGT ACGGAAAATA TCCAGCAATT TTAACGGATG AGGTTGTGGG TAAAGAAGCA
ACTTCTGTTT TTAACGATGC TCAGGCAATG TTGAAAGTGA TTTTAGAAGA GAAAAAATTA
AAAGCAAAAG GTATTTACGG AATTTTCCCT GCCAATCAGG TAAATGATGA CGATATCGAA
TTGCGTGATG AAAACGGAAA AGTTTTAGAA AAATTCTTAA CGCTTCGTCA GCAGTCACAA
AAAACAAAAG GAGCTCCAAA CATCGCTTTA GCTGATTTTA TTCTGCCAAA AGAAAGCGGA
ATAGAAGATT ATATTGGAGC TTTTTGTGTA ACAACAGGTT TCGGTGTAGA CGAATGGGCG
GCTGAATATG AAAAGAATTT AGACGATTAC AATTCGATTA TGGTAAAAGC GCTTGCCGAT
CGTTTTGCTG AGGCTTTCGC CGAATACCTT CATGAGAGAG TACGTAAAGA TTTCTGGGGT
TATGATGTCG ATGAATCTTT AACCAACGAA GAATTGATTA AAGAAAGTTA TAAAGGAATT
CGTCCAGCTC CGGGTTATCC AGCTTGTCCA GATCACTTGG AAAAACCAAC AATCTGGAAG
CTTTTAGATG TTGAAAAACA AATAGGAGTG AAACTAACAG AAAGCATGGC AATGTGGCCG
GCTTCTTCGG TTTCAGGATA TTATTTCGGA AACCCAAAAA GCCGCTATTT CGGACTCGGA
AAAATAAAAG AAGATCAAGT TACAGATTAC GCAAAACGCC GAAATGTACC GCTTGATTAC
GCAATGAAGT GGTTAAACCC TAATATAGCA GATTAA
|
|---|
| Protein sequence | MTEKRRDLVL SGLEPLIITP ESVFVNVGER TNVTGSRKFL RLIKEEKYDE ALDIARQQVE
SGAQIIDINM DEGMLDGVNA MTKFLNLIAA EPDISRVPIM IDSSKWEIIE AGLKVVQGKS
VVNSISLKEG EEAFIHHAKL IKRYGAAAIV MAFDEVGQAD NYDRRVEICQ RSYDILVNKV
NFPPQDIIFD LNIFPVATGM EEHRLNALDF FRGTKWVREN LPHAHISGGV SNVSFSFRGN
DVVREAMHSV FLYHAIKEGM TMGIVNPEML TIYDDIPKDL LEHVEDVILD RRDDATERLL
DFAENVKGEA KSDEKVVQEW RFGTVQDRIT HSLVKGIDAF IEEDVEEARL AATKPIEVIE
INLMTGMNVV GDLFGSGKMF LPQVVKSARV MKKAVAYLLP FIEASKQAGD KQGNGKILMA
TVKGDVHDIG KNIVSVVLAC NNYEIVDLGV MVPPEKIIAA AIEHEVDIIG LSGLITPSLD
EMVYLAKELD KQDIKIPIMI GGATTSRAHT AVKIAPQYRE TVIHVNDASR AVTVAGNLLD
HNRKIYAADI RAEYDSFRET FLNRSRDKNF LTIEDARKNK LPLDWSEYTP TKPKVIGAQT
IEIELDVLVP YIDWTPFFQT WELYGKYPAI LTDEVVGKEA TSVFNDAQAM LKVILEEKKL
KAKGIYGIFP ANQVNDDDIE LRDENGKVLE KFLTLRQQSQ KTKGAPNIAL ADFILPKESG
IEDYIGAFCV TTGFGVDEWA AEYEKNLDDY NSIMVKALAD RFAEAFAEYL HERVRKDFWG
YDVDESLTNE ELIKESYKGI RPAPGYPACP DHLEKPTIWK LLDVEKQIGV KLTESMAMWP
ASSVSGYYFG NPKSRYFGLG KIKEDQVTDY AKRRNVPLDY AMKWLNPNIA D
|
|---|
| |