Gene Fjoh_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1460 
Symbol 
ID5092466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1673609 
End bp1674856 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content34% 
IMG OID644740867 
Producthypothetical protein 
Protein accessionYP_001193811 
Protein GI146299220 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCTTT ATCTAAGATT ATTAAAAGAA AGTCTAAGCT TTGCCATAAA CGCTTTACGA 
AATAATAAAC TTCGTACTTT GTTGTCGTTA TTGGGTGTTA CAATTGGTAT TTTTTCAATA
ATTGCCGTCT TGGCTGCAGT TGATTCTTTA GACAAAAAAA TCTCTAAAGA TTTGAGCAGT
TTAGATAAAA ATACGATTTA TTTAATGAAA TTCAGTTTTG GGCCTTCAGA AATTCCACAA
TGGAAGAGAG AACAGTTTCC AAATGTGAAA TATGATGAAT ATGTTAACTT AAAAAATTCT
CTTAATAATA CAGATCAGGT TGGGTATCAG CTTTGGGTTA ATAAAGAAAC TTTAAAATAT
GATTCTAAAA CTGTAGCCGA TGTAAGGATT AATCCATCTT CATTTGAAAT GGGGGATATT
GATGGTTTAA GTTTTGAAAA AGGACGATTT TATAATGAAT CTGAATCGAA CTCAGGAACT
GCTGTAATTG TTTTGGGATA CGAAATTGCT CAGGGACTTT TTGGGGATAT TGATCCAATT
GGTAAAAATA TCCGATTGTA TGGCCAGCGT TTTACTGTAA TTGGTGTAAT TGCCAAACAA
GGTGCGGGTT TTTTTGGAGA CAGTAATGAT ACATCAGTTT ATCTGCCGGC TAATTTTTTA
CGCCGAATGT ATGGCGACAG CGATGCAATG ACTCCAATGA TTATTTTAAA ACCTACTAAA
GGTGTTGATA TGGAAGCTTA TAAAGCTGAA GTTTCCCAAA AATTAAGAGC AATTCGCGGA
ATGAAAGCAG GAGAAATGGA TAACTTTTTC ATAAATGTGC TTTCTGGTTT TACTGATTTT
ATCGACGGAA TTTTAGGCCA GATGAATGTA GTAGGGTGGA TTATCAGCGG ATTTTCTCTT
TTGGTCGGCG GTTTCGGAAT TGCCAATATT ATGTTTGTAT CGGTTAAAGA AAGAACCAAT
TTAATTGGTA TTCAAAAATC ATTGGGAGCC AAAAACAGAT TTATATTATT TCAGTTTTTA
TTTGAAGCTA TAATTCTCTC TGTAATTGGC GGAATTATTG GTTTATTGAT GGTTTGGGGA
ATTGCAGTTA TTTTAACCAA AGCACTGGAT TTTGAATTTG TATTGAGCTT TGGAAATATA
ATTTTGGGAA CAACTTTAGC GGCGCTTATT GGATTGATTT CGGGTATTCT GCCGGCTATT
TCTGCAGCAA ATCTTGATCC TGTAGAAGCA ATTAGAACAG GGATGTAG
 
Protein sequence
MLLYLRLLKE SLSFAINALR NNKLRTLLSL LGVTIGIFSI IAVLAAVDSL DKKISKDLSS 
LDKNTIYLMK FSFGPSEIPQ WKREQFPNVK YDEYVNLKNS LNNTDQVGYQ LWVNKETLKY
DSKTVADVRI NPSSFEMGDI DGLSFEKGRF YNESESNSGT AVIVLGYEIA QGLFGDIDPI
GKNIRLYGQR FTVIGVIAKQ GAGFFGDSND TSVYLPANFL RRMYGDSDAM TPMIILKPTK
GVDMEAYKAE VSQKLRAIRG MKAGEMDNFF INVLSGFTDF IDGILGQMNV VGWIISGFSL
LVGGFGIANI MFVSVKERTN LIGIQKSLGA KNRFILFQFL FEAIILSVIG GIIGLLMVWG
IAVILTKALD FEFVLSFGNI ILGTTLAALI GLISGILPAI SAANLDPVEA IRTGM