Gene Fjoh_1444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1444 
Symbol 
ID5092450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1657114 
End bp1659258 
Gene Length2145 bp 
Protein Length714 aa 
Translation table11 
GC content38% 
IMG OID644740851 
Productpolynucleotide phosphorylase/polyadenylase 
Protein accessionYP_001193795 
Protein GI146299204 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) 
TIGRFAM ID[TIGR03591] polyribonucleotide nucleotidyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCCAC AAGTTTCACA AGAAATTATC GATTTAGGAG ATGGAAGAAG CATCTCAATC 
GAGACTGGTA AATTAGCAAA ACAAGCCGAT GGTTCAGTTG TTGTACGTTT AGGAAACTGT
ATGCTTTTAG CAACTGCAGT TTCTGCAAGA ACATCTAACC CAGGTGTTGA CTTTTTACCA
TTAACGGTAG ATTACCGTGA AAAATTTGCT GCTGCAGGAC GTTTCCCAGG AGGATTTTTC
AAAAGAGAAG CCAGACCTAG CGACAGCGAA GTATTAACGA TGAGATTAGT TGACCGTGTT
TTACGTCCGC TTTTCCCAGA CGATTACCAC GCCGAAACTC AGGTTATGAT TCAATTAATG
TCTCATGATG ACAATGTTAT GCCAGATGCA TTAGCTGGTT TAGCAGCATC TGCAGCATTA
GCAGTTTCAG ATATTCCATT TTACAACTTA ATCTCTGAAG TACGTGTTGC ACGTATAGAC
GGAAAATTAG TAATCAACCC AAGCAGAACT GAATTAGAAA AATCTGACAT CGATATGATG
ATCGGTGCTT CTCTGGATTC TGTTGCAATG GTTGAAGGTG AGATGAAAGA AATCTCAGAA
GCTGAAATGA TCGAGGCTAT CAAATTTGCA CATGAAGCTA TTAAAGTTCA AATTCATGCT
CAGCAAAAAT TAAGAGCAAA ACTTAGCTCT CAAGAATACA GAACTTATGA AGGTGAAGTT
GAAGACGAAG CTGTTTATGC TAAAGTAAAA GCTGCTGCTT ACGATAAATG TTATGCAATT
GCACAAGAAG CTTCTGGAAA AGCAGAAAGA GGTGAAAAAT TTGCAACTGT AAAAGAAGAA
GCAAAAGCTT TGTTTACAGA AGAAGAATAT GCTGAAAATG CAGATCTTGC AGGTTTAGTT
GGAAAATATT TCTACAAGAC AAACAAGGAA GCTGTTCGTA ACGTAATTCT TGAAAAAGGA
ATTCGTTTAG ATGGAAGAAA AACTACAGAA ATCAGACCAA TCTGGTGTGA AACTGATTAC
TTACCATCTG TACACGGTTC TTCTTTATTT ACACGTGGAG AAACTCAGGC TTTGGCTACA
GTAACTTTAG GAACTTCTAG AGAAGCTAAC CAAATCGATT CTCCATCTGA ACAAGGTGAA
GAAAAATTCT ACTTACACTA TAACTTCCCT CCTTTTTCTA CTGGTGAAGC AAAACCATTA
AGAGGAACTT CAAGAAGAGA AGTTGGCCAC GGTAACTTAG CTCAAAGAGC TTTAAAAAAT
ATGATTCCTG CAGATTGTCC TTATACAATT CGTGTTGTTT CTGAGGTTTT AGAATCTAAC
GGTTCTTCTT CTATGGCAAC AGTTTGTGCT GGAACAATGG CTTTGATGGA TGCTGGAGTT
CAAATGGTAA AACCAGTTTC TGGTATTGCT ATGGGATTAA TTACTGACGG TGAGAAATTT
GCTGTATTGT CTGATATCTT AGGAGATGAA GATCACTTAG GAGATATGGA CTTTAAAGTA
ACAGGAACTG CTGACGGTAT CACAGCTTGT CAAATGGACA TCAAAATTGA TGGTTTACGT
TATGACATCA TGGAACAAGC TTTAGCTCAG GCTCGTGATG GACGTTTACA CATTTTAGGT
AAATTAACTG AAACTATCGC AGCGCCAAGA GCAGATGTTA AAGCTCATGC ACCAAAAATT
ATTACCAGAA CTATTCCTGG AAACTTTATT GGAGCATTAA TTGGACCTGG AGGAAAAGTA
ATTCAGGAAT TACAAAAAGC TACAGGAACT ACTATCGTAA TTAACGAAGT TGATGAGCAA
GGTGTAGTTG AAATCTTAGG AACTGATCCA GAAGGTATCA AAACAGTATT AGCTAAAATT
GATGCATTAA CTTTCAAACC GCAGGTTGGA GAAGCTTACG AAGTAAAAGT AATTAAGATG
CTTGATTTTG GAGCTGTTGT AGAATATACT GCTGCACCAG GAAACGAAGT ATTGCTTCAC
GTATCTGAAT TAGCTTGGGA ACGTACAGAA AACGTTGCTG ATGTAGTTAA AATGGGAGAT
GTCTTTGAAG TGAAATATTT AGGAGTTGAC CCTAAAACTA AAAAAGAAAA AGTGTCTAAA
AAAGCACTTG TTCCAAGACC TCCGCGTGAG GACAAAAAAG AGTAA
 
Protein sequence
MIPQVSQEII DLGDGRSISI ETGKLAKQAD GSVVVRLGNC MLLATAVSAR TSNPGVDFLP 
LTVDYREKFA AAGRFPGGFF KREARPSDSE VLTMRLVDRV LRPLFPDDYH AETQVMIQLM
SHDDNVMPDA LAGLAASAAL AVSDIPFYNL ISEVRVARID GKLVINPSRT ELEKSDIDMM
IGASLDSVAM VEGEMKEISE AEMIEAIKFA HEAIKVQIHA QQKLRAKLSS QEYRTYEGEV
EDEAVYAKVK AAAYDKCYAI AQEASGKAER GEKFATVKEE AKALFTEEEY AENADLAGLV
GKYFYKTNKE AVRNVILEKG IRLDGRKTTE IRPIWCETDY LPSVHGSSLF TRGETQALAT
VTLGTSREAN QIDSPSEQGE EKFYLHYNFP PFSTGEAKPL RGTSRREVGH GNLAQRALKN
MIPADCPYTI RVVSEVLESN GSSSMATVCA GTMALMDAGV QMVKPVSGIA MGLITDGEKF
AVLSDILGDE DHLGDMDFKV TGTADGITAC QMDIKIDGLR YDIMEQALAQ ARDGRLHILG
KLTETIAAPR ADVKAHAPKI ITRTIPGNFI GALIGPGGKV IQELQKATGT TIVINEVDEQ
GVVEILGTDP EGIKTVLAKI DALTFKPQVG EAYEVKVIKM LDFGAVVEYT AAPGNEVLLH
VSELAWERTE NVADVVKMGD VFEVKYLGVD PKTKKEKVSK KALVPRPPRE DKKE