Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1444 |
Symbol | |
ID | 5092450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 1657114 |
End bp | 1659258 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644740851 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_001193795 |
Protein GI | 146299204 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCCAC AAGTTTCACA AGAAATTATC GATTTAGGAG ATGGAAGAAG CATCTCAATC GAGACTGGTA AATTAGCAAA ACAAGCCGAT GGTTCAGTTG TTGTACGTTT AGGAAACTGT ATGCTTTTAG CAACTGCAGT TTCTGCAAGA ACATCTAACC CAGGTGTTGA CTTTTTACCA TTAACGGTAG ATTACCGTGA AAAATTTGCT GCTGCAGGAC GTTTCCCAGG AGGATTTTTC AAAAGAGAAG CCAGACCTAG CGACAGCGAA GTATTAACGA TGAGATTAGT TGACCGTGTT TTACGTCCGC TTTTCCCAGA CGATTACCAC GCCGAAACTC AGGTTATGAT TCAATTAATG TCTCATGATG ACAATGTTAT GCCAGATGCA TTAGCTGGTT TAGCAGCATC TGCAGCATTA GCAGTTTCAG ATATTCCATT TTACAACTTA ATCTCTGAAG TACGTGTTGC ACGTATAGAC GGAAAATTAG TAATCAACCC AAGCAGAACT GAATTAGAAA AATCTGACAT CGATATGATG ATCGGTGCTT CTCTGGATTC TGTTGCAATG GTTGAAGGTG AGATGAAAGA AATCTCAGAA GCTGAAATGA TCGAGGCTAT CAAATTTGCA CATGAAGCTA TTAAAGTTCA AATTCATGCT CAGCAAAAAT TAAGAGCAAA ACTTAGCTCT CAAGAATACA GAACTTATGA AGGTGAAGTT GAAGACGAAG CTGTTTATGC TAAAGTAAAA GCTGCTGCTT ACGATAAATG TTATGCAATT GCACAAGAAG CTTCTGGAAA AGCAGAAAGA GGTGAAAAAT TTGCAACTGT AAAAGAAGAA GCAAAAGCTT TGTTTACAGA AGAAGAATAT GCTGAAAATG CAGATCTTGC AGGTTTAGTT GGAAAATATT TCTACAAGAC AAACAAGGAA GCTGTTCGTA ACGTAATTCT TGAAAAAGGA ATTCGTTTAG ATGGAAGAAA AACTACAGAA ATCAGACCAA TCTGGTGTGA AACTGATTAC TTACCATCTG TACACGGTTC TTCTTTATTT ACACGTGGAG AAACTCAGGC TTTGGCTACA GTAACTTTAG GAACTTCTAG AGAAGCTAAC CAAATCGATT CTCCATCTGA ACAAGGTGAA GAAAAATTCT ACTTACACTA TAACTTCCCT CCTTTTTCTA CTGGTGAAGC AAAACCATTA AGAGGAACTT CAAGAAGAGA AGTTGGCCAC GGTAACTTAG CTCAAAGAGC TTTAAAAAAT ATGATTCCTG CAGATTGTCC TTATACAATT CGTGTTGTTT CTGAGGTTTT AGAATCTAAC GGTTCTTCTT CTATGGCAAC AGTTTGTGCT GGAACAATGG CTTTGATGGA TGCTGGAGTT CAAATGGTAA AACCAGTTTC TGGTATTGCT ATGGGATTAA TTACTGACGG TGAGAAATTT GCTGTATTGT CTGATATCTT AGGAGATGAA GATCACTTAG GAGATATGGA CTTTAAAGTA ACAGGAACTG CTGACGGTAT CACAGCTTGT CAAATGGACA TCAAAATTGA TGGTTTACGT TATGACATCA TGGAACAAGC TTTAGCTCAG GCTCGTGATG GACGTTTACA CATTTTAGGT AAATTAACTG AAACTATCGC AGCGCCAAGA GCAGATGTTA AAGCTCATGC ACCAAAAATT ATTACCAGAA CTATTCCTGG AAACTTTATT GGAGCATTAA TTGGACCTGG AGGAAAAGTA ATTCAGGAAT TACAAAAAGC TACAGGAACT ACTATCGTAA TTAACGAAGT TGATGAGCAA GGTGTAGTTG AAATCTTAGG AACTGATCCA GAAGGTATCA AAACAGTATT AGCTAAAATT GATGCATTAA CTTTCAAACC GCAGGTTGGA GAAGCTTACG AAGTAAAAGT AATTAAGATG CTTGATTTTG GAGCTGTTGT AGAATATACT GCTGCACCAG GAAACGAAGT ATTGCTTCAC GTATCTGAAT TAGCTTGGGA ACGTACAGAA AACGTTGCTG ATGTAGTTAA AATGGGAGAT GTCTTTGAAG TGAAATATTT AGGAGTTGAC CCTAAAACTA AAAAAGAAAA AGTGTCTAAA AAAGCACTTG TTCCAAGACC TCCGCGTGAG GACAAAAAAG AGTAA
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Protein sequence | MIPQVSQEII DLGDGRSISI ETGKLAKQAD GSVVVRLGNC MLLATAVSAR TSNPGVDFLP LTVDYREKFA AAGRFPGGFF KREARPSDSE VLTMRLVDRV LRPLFPDDYH AETQVMIQLM SHDDNVMPDA LAGLAASAAL AVSDIPFYNL ISEVRVARID GKLVINPSRT ELEKSDIDMM IGASLDSVAM VEGEMKEISE AEMIEAIKFA HEAIKVQIHA QQKLRAKLSS QEYRTYEGEV EDEAVYAKVK AAAYDKCYAI AQEASGKAER GEKFATVKEE AKALFTEEEY AENADLAGLV GKYFYKTNKE AVRNVILEKG IRLDGRKTTE IRPIWCETDY LPSVHGSSLF TRGETQALAT VTLGTSREAN QIDSPSEQGE EKFYLHYNFP PFSTGEAKPL RGTSRREVGH GNLAQRALKN MIPADCPYTI RVVSEVLESN GSSSMATVCA GTMALMDAGV QMVKPVSGIA MGLITDGEKF AVLSDILGDE DHLGDMDFKV TGTADGITAC QMDIKIDGLR YDIMEQALAQ ARDGRLHILG KLTETIAAPR ADVKAHAPKI ITRTIPGNFI GALIGPGGKV IQELQKATGT TIVINEVDEQ GVVEILGTDP EGIKTVLAKI DALTFKPQVG EAYEVKVIKM LDFGAVVEYT AAPGNEVLLH VSELAWERTE NVADVVKMGD VFEVKYLGVD PKTKKEKVSK KALVPRPPRE DKKE
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