Gene Fjoh_1442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1442 
Symbol 
ID5092448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1654666 
End bp1656396 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content28% 
IMG OID644740849 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001193793 
Protein GI146299202 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAA TTAACTTTTC TATTTTACTA CTTTTTCTTT TATGCCCTTT CTTTTTTTTC 
TCACAAAACA AAACCACCAA TAAGATTTTC AATATTGAAA GCAAAAAAAA AGCGATTACA
TTTAAAAAAG AAATTCATTT TAATAAGGCA CAATATTATT TCGAAGAAAA CAATTGGGAC
TCGACTTTAG TATACTCCAT GAAGCATTTA AGCAGCAGTG GTAATAAGGA ATTAAACGAC
TATTGTCATT ACTTTAGAGG TTTTAGTTTA AATGAAAAAA AATTATTTAC AGAAGCAAAA
TCCGAGTTAA AATTAATATC GAAAGATTTT ACTTTTTATC CATTAGTAAA TAAAGTTCTA
GGGGAAATTT CTCTGCAATT AAAAGAATTT GAAAAAGCAA TTGAATATTT TAATGCAATA
GAAAAATATC CTTATTCAAG TAAACAAGGA TTTAAAGTAA GTACTATTTA TCAAAATATT
GGGGTTTGTT ACTTACATCT TAACAAATTC AAAAAAGCAG AAGAATATCT TTTTAAAAGT
AAAAAAATTG GAGAACAAGA AAAAGATAAT GAGGCACTTA TTTATATTTA TATGAATATT
GCAAATCTCT ATTATTTACA ATACCAAGAT GCAAAAGCTA TTCCTTATTT TGAAAAAGCA
TATTTGTATT CTAAAAAAAC GAAAAATTTC GATAAAAAAG AATCCACGGC ATTTAATATG
GCGATGGTAG AAGAAAATAA AGGCGATTTA AAAAAAGCTT TAGAATATAG AAAAGAAGCT
GAACAATGGA AAGATTCTGT ACATAATCAA AATAAAATTT GGGCTGTTGC TGATTTTGAG
AAAAAATTTG CGGTAGCACA AAAGCAAAAG GAAATCAAAG TATTACAGGT AGAAAACAAA
TTAAAAAACA CCCAGCGTAA TGCATTATTT TTCTCAGCAA TTGCTCTTTT ATTAATTTTA
ACCGGCGGTG TTTATTTATA TGCACAAAGA GTGAAAAGCA GTAAAATTAT TTTACGCCAG
AAAAACAAAC TTGACGAACT AAATGCCACT AAAGATCAAT TATTTTCTAT AGTAAGCCAT
GATTTACGTT CTTCAGTAAA TGCTTTAAAA TCCAGTAATT CAAAATTATC TGCCACTCTC
GAAACCAAAA ATTATGATGA ATTAAATCAA TTAATTGTTC AAAACAGCAG CATTGCAAAC
GGTACTTACA GCCTTTTAGA TAATTTATTA CATTGGGCAT TACTACAGAC TAAACAATTG
TATTTTCATA AAGAATCGAT TCATTTGCAT TCTGTAATTC AACAAATTGC ATACAATTAT
AAACCTTTAT TACTGGAAAA AGCCATTACA TTTGAAAATC TGGTTTCAAA AAGCATCTTT
TTGTTTGTAG ACCTTGATTC ACTAAAAATT GTATTTAGAA ATTTATTAGA CAATGCGATA
AAATTTTCGA AAGAAAATGG ACAAATTACC TTTTCTGCAA ATGAAATCGA TTCTGATTAT
TGTCAGGTCA TAATTCAGGA TAAAGGAATT GGAATGAGCA GAAACACCAT CGACGAATTG
CTTCAGGAAG GCGAATTACT GGCTAAAAAA GGCAATTCAG AAATTATTGG AACCGGTTTG
GGTTTACAGT TATGCAAGCA GATGATTAAG AAAAACAGCG GTACATTTGA AATAGAAAGT
GAACTCAATA AAGGAACTAA AATGATATTA ACTTTTCCAA AAACAAAATG A
 
Protein sequence
MFKINFSILL LFLLCPFFFF SQNKTTNKIF NIESKKKAIT FKKEIHFNKA QYYFEENNWD 
STLVYSMKHL SSSGNKELND YCHYFRGFSL NEKKLFTEAK SELKLISKDF TFYPLVNKVL
GEISLQLKEF EKAIEYFNAI EKYPYSSKQG FKVSTIYQNI GVCYLHLNKF KKAEEYLFKS
KKIGEQEKDN EALIYIYMNI ANLYYLQYQD AKAIPYFEKA YLYSKKTKNF DKKESTAFNM
AMVEENKGDL KKALEYRKEA EQWKDSVHNQ NKIWAVADFE KKFAVAQKQK EIKVLQVENK
LKNTQRNALF FSAIALLLIL TGGVYLYAQR VKSSKIILRQ KNKLDELNAT KDQLFSIVSH
DLRSSVNALK SSNSKLSATL ETKNYDELNQ LIVQNSSIAN GTYSLLDNLL HWALLQTKQL
YFHKESIHLH SVIQQIAYNY KPLLLEKAIT FENLVSKSIF LFVDLDSLKI VFRNLLDNAI
KFSKENGQIT FSANEIDSDY CQVIIQDKGI GMSRNTIDEL LQEGELLAKK GNSEIIGTGL
GLQLCKQMIK KNSGTFEIES ELNKGTKMIL TFPKTK