| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1398 |
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| Symbol | |
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| ID | 5093181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 1592291 |
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| End bp | 1593952 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644740804 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001193749 |
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| Protein GI | 146299158 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT ACACTTTCCT TTATCTATCT TTAGTATTCT TAATAATGGG TTGTTCTGGC
TCAAAATCAG TTACAATGAA TAATACTTCA AAGACACCTT TCGTTTGGGA AGGAGCAAAT
GTTTATTTTT TACTTACAGA TCGTTTTTAC AACGGAGACA CTTCCAACGA CGTCAATTTT
AACCGAACCA AAACTCCGGG AAAACTTCGC GGATTTGAAG GCGGTGACAT CATCGGAATC
ACTAAAAAAA TCGAATCTGG ATATTTTGAA AAATTAGGAA TCAATGCCAT TTGGCTTACG
CCGATTGTCG AGCAAATTCA CGACGGCGTT GATGAAGGAA CTGGATTGAG TTATGGTTTT
CACGGTTATT GGGCAAAAGA CTGGACCGCC TTAGATCCCA ACTTTGGAAC AAAAGAAGAC
TTAGCAAATC TCGTTAAAAA AGCACACGAA AAAGGCATCA GAATAATTCT GGATGGCGTA
ATTAATCATA CAGGACCAGT AACACCAGAA GACCCTGTTT GGCCTTCAGA TTGGGTTAGA
ACGGGCGTAG TTTGCGATTA TAAATCATTC GAAAATACAA CAATGTGTAC TTTGGTTGAC
AATCTTCCAG ATATTAGAAC TGAAAGTGTA CAAGAAGTCG AACTTCCTCT TCTTTTAATT
GAAAAATGGA AAAAAGAAGA CCGTTATGAA AAAGAAATTG CTTCGTTGGA CGAGTTCTTT
AAAAGAACAG GTTACCCAAG AACTCCGAAA TATTACATCA TCAAATGGCT TACAGATTAC
ATTCTGGAAT TCGGAATTGA CGGCTACCGT GCTGATACTG TAAAACACAC TGAAGAAGCC
CTTTGGGCGG ATTTCAAAAA AGAATGTGAT TATGCATTTG AGACTTGGAA AAAACATCAT
CCTTTACAAG TTTTAGATCA AAATCCGTTT TATACAATTG CCGAAGTTTA CGGTTACGGA
ATCAGCGGAG GGCAGGATTA TGATTTTGGA GACCGAAAAG TCAATTATTT CCAAAATGGT
TTCAACAGCA TGATCAATTT CGAGTTTAAA TGGAATGCTG CCCAAAACGA TTACGAAGGT
TTATTTTCTA AATATTCGAA TGCACTTAAC AATGATTTAA AAGGATATTC TGTCCTTAAT
TATATGTCTT CTCATGACGA CGGTCAGCCT TTTGATGCCA ACAGAACCAA AAGCATCGAA
ACCGCAAATA AACTATTGCT TTCGCCTGGA ATGTCTCAGG TTTATTATGG AGATGAATCT
GCAAGATCTT TAGTTATTGA AGGAACTCAA GGCGATGCAA CATTACGTTC TAATATGAAT
TGGGAGGATA TTCAGAATAA TCCAGAAACA CAGAAAACGC TTTTGCATTG GCAGAAATTA
GGTCAGTTTA GACGAAACCA TCCTGCTGTT GGAGCGGGTG TTCACAAACT TATTAATCCG
TATCCTTATA CTTTTTCCAG AACATTTACA AAAGGCTCTT TTATAGATAA AGTAGTTATG
GGAGTAGATT TACCAAAAGG CAGAAAAGAA CTTCCTGTTG GCGACGTCTT CCCAAACGGA
ACAAAACTAA AAGACACATA CTCGAATCAA GAAGTCGAAG TAATAGATGG AAAAGTGATT
ATCGACAATG ATTTTGACAT TGTTTTACTA GAAGAAATTT AA
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| Protein sequence | MKKYTFLYLS LVFLIMGCSG SKSVTMNNTS KTPFVWEGAN VYFLLTDRFY NGDTSNDVNF
NRTKTPGKLR GFEGGDIIGI TKKIESGYFE KLGINAIWLT PIVEQIHDGV DEGTGLSYGF
HGYWAKDWTA LDPNFGTKED LANLVKKAHE KGIRIILDGV INHTGPVTPE DPVWPSDWVR
TGVVCDYKSF ENTTMCTLVD NLPDIRTESV QEVELPLLLI EKWKKEDRYE KEIASLDEFF
KRTGYPRTPK YYIIKWLTDY ILEFGIDGYR ADTVKHTEEA LWADFKKECD YAFETWKKHH
PLQVLDQNPF YTIAEVYGYG ISGGQDYDFG DRKVNYFQNG FNSMINFEFK WNAAQNDYEG
LFSKYSNALN NDLKGYSVLN YMSSHDDGQP FDANRTKSIE TANKLLLSPG MSQVYYGDES
ARSLVIEGTQ GDATLRSNMN WEDIQNNPET QKTLLHWQKL GQFRRNHPAV GAGVHKLINP
YPYTFSRTFT KGSFIDKVVM GVDLPKGRKE LPVGDVFPNG TKLKDTYSNQ EVEVIDGKVI
IDNDFDIVLL EEI
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