Gene Fjoh_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1397 
Symbol 
ID5093180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1591427 
End bp1592110 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content31% 
IMG OID644740803 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_001193748 
Protein GI146299157 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTTT TAAAGATTGC ACACAGAGGC GCCAAAGCCT ACGAACCTGA AAATACTTTA 
CAAGCTTTCC AAAAAGCCTT AGATCTAAAT TCAGACGGAA TTGAACTTGA TGTTCATTTG
AGTTCCGATG AACATTTAAT TGTAATTCAC GACGAAACTA TCGACAGAAC CACAAATGGA
AAAGGTTTTG TAAATGATTT TACTTTAACA GAATTAAAAT CATTTTTAAT TGATGGAAAA
TATCAAATCC CAACTTTAAA TGAAGTTTTC GATTTGGTTG ACAAAAAGTG CCTCATCAAT
ATTGAATTAA AAGGTTTAGG AACTGCGTCT AAAGTTGTTG CATTAATTGA GAAATATGTC
TCAGAAAAAA ACTGGAATTA CAATCATTTT ATCATTTCAA GTTTTGATTG GAATATGTTG
GAGGAAACAT CAAACTTAAA TTCAAACATC CCGATTGGTG TTCTAACAGA AGAAAATATA
GAAACTGCTT TGGCTTTCGC CGAAAAAATA AAAGCAAAAG CCATAAATCC TGATTTTCAA
TTATTGAATA TTGAAAATGT TCATCAAATG CAGGAAAAAG GATTCTTAGT TTTACCATGG
ACAGTAAACA CAGAAGAAGA CATTCAAAAA GTAAAAAGTT ACAACGTAAA CGGAATTATC
TCTGATAATC CAGATAAAAT ATAA
 
Protein sequence
MNVLKIAHRG AKAYEPENTL QAFQKALDLN SDGIELDVHL SSDEHLIVIH DETIDRTTNG 
KGFVNDFTLT ELKSFLIDGK YQIPTLNEVF DLVDKKCLIN IELKGLGTAS KVVALIEKYV
SEKNWNYNHF IISSFDWNML EETSNLNSNI PIGVLTEENI ETALAFAEKI KAKAINPDFQ
LLNIENVHQM QEKGFLVLPW TVNTEEDIQK VKSYNVNGII SDNPDKI