| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1345 |
|---|
| Symbol | |
|---|
| ID | 5092350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 1538834 |
|---|
| End bp | 1539538 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 644740748 |
|---|
| Product | LytTR family two component transcriptional regulator |
|---|
| Protein accession | YP_001193696 |
|---|
| Protein GI | 146299105 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAA AATACACTTG TATTATTATT GATGACGACG AAATCGACAG GCTGACTGTA
TTGTCTTTTG CAAAAAAATT CCCGATTCTG GATATTTTAG GTGTTTTTGA TTCTGCCGAA
GAAGCACTTC CTTTTATAGA AAAACAAAAA GTTGATATTT TGTTTCTGGA TATTGATATG
CCAGAATTAA ACGGTATTGA ATTCAGAAAA CAAGCAATGG AAATTCCGGT TTGTATTTTT
ATTACCGCGC ATCCCGAACA TGCGGTTGAA AGTTTTCAGA TAGAAACGCT TGATTTTATT
GTAAAACCAT TAAAACTGGA ACGTTTCGCC CAAACTGTAA ACCGAATTGA AGAGTTTATG
GAAATTCGGT TAAAAGCTTC TCTCTTTGAA GCCAGCATTG GCGGTGATAC GATTTATATA
AAAGAAGGCC ACGACCAGAC CAAAGTTAAA CTTCACGAGA TCTTATATCT CGAAGCTTTA
AAGGACTATA CTTTGATTAT TACCGATAAA AAAAGACATT GTGTTCTATC AAGTATTGGT
AATCTTTTAA AAGAAGATCA TTTCCAATCT TTTATACGAA TTCATAGAAG TTATGCCGTT
CAAAAGCAGT TTATTCAAAA AATGAATTCG ACAGAAATCA TTTTAAACAA TAATATTACA
ATTCCGGTTG GCAGAAGTTA TAAAGAAAAC CTAAACCTGA TTTAG
|
|---|
| Protein sequence | MMKKYTCIII DDDEIDRLTV LSFAKKFPIL DILGVFDSAE EALPFIEKQK VDILFLDIDM
PELNGIEFRK QAMEIPVCIF ITAHPEHAVE SFQIETLDFI VKPLKLERFA QTVNRIEEFM
EIRLKASLFE ASIGGDTIYI KEGHDQTKVK LHEILYLEAL KDYTLIITDK KRHCVLSSIG
NLLKEDHFQS FIRIHRSYAV QKQFIQKMNS TEIILNNNIT IPVGRSYKEN LNLI
|
|---|
| |