Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1314 |
Symbol | |
ID | 5092319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 1504007 |
End bp | 1506214 |
Gene Length | 2208 bp |
Protein Length | 735 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644740717 |
Product | TonB-dependent receptor |
Protein accession | YP_001193665 |
Protein GI | 146299074 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TCATAATAGC CCTTGTTTTA GGGTTTTCGG GCTTGCTTTC TGCCCAAAAT TCAGTTTCAG GAACTGTAAC CGATAATCAA AATAATCCAT TACCGGGCGT TTCAGTTTAT GCACCTGAAT TACATAAAGG AACCACTACA GATGCAAACG GGAAATACGA ATTGAACAAT CTTCCAAACG GAAGTCTTCG AATTGCTTTT ACTTATGTTG GATATGCCAA TCAAAATAAA ACTATTGCAA AATTATTGAA GCAAAATACT TTAGATATTA CTCTTGAAGA ATCGATTCTG GAAATGGATG AAGTTGTGGT TTCAACTCCT TTCAATAAAC TGCAGTCACA AAACGTAATG AAAATTGAGC ATGAAAGCAT CAAAACATTA CAGCAAAAAG GAACTTCAAC TTTAATTGAA GGTTTGGCAA CTATTCCCGG AGTAGCACAG ATTTCTACCG GAACTTCTAT TGGGAAACCC GTAATTCGTG GATTAAGCGG TAATCGTGTA TTGGTTTATT CTCAAGGCGT TCGTATCGAA AATCAGCAGT TTGGAGACGA ACATGGTTTA GGTTTAAACG ATGCCGGAAT AGAAAGTGTT GAAGTAATTA AAGGTCCGGC ATCTTTATTA TACGGCTCTG ATGCTTTGGG AGGGGTTTTA TATTTTAATC CTGAAAAATT TGCTGATGCA GGTACTTTTA AAGCTAATTT CAGCCAAAAA TATTTTACAA ATACACAAGG AAGTAATTCT TCTATTGGTT TAAAAACTTC TACAGACAAC TGGAAATTTC TGGCTCGCGG AAGTTACAAC ACGCATTCAG ATTACAAAAT TGCCGATGGT GATCGTGTAA CTAATTCACG TTACAACGAA ACTGATTTTA AAACCGGAAT TGGCTACAGC AATTCGAGTT TTTCTAGTGT TTTGAGATAC AATTACAATA AATTGGATAT TGGAATTCCG GAAGATGGAA TTGCTGAGCA GTCTTCAAGC AAAGACACGC AGTTTCCAAG ACAGGGAATT TTTAATCATT TATTGAGTTT AAACAATGTT ATCTTTTTTG AAAACTCAAA ACTTGATGTT GATTTAGGAT ATATCTCTAA TGACAGAAGC GAATTTGAAG ACAGTAACGA AGCTTCTCTT CACATGAAAT TGAATACTTT CAACTATAAT GCAAAATATC ATTTTCCAAA ATTCGGAAAA ATTGAAACTA TTTTAGGCGT TCAGGGAATG CATCAAACGA ATAAAAATTC GGGTGAAGAA TATTTAATTC CAGATGCTAC AACAAACGAT TTTGGAGTTT TTGGAACTGC AAATTACGAA TGGGACAACA GTGTTATTCA GGCTGGACTG CGTTTTGACA ACCGAAATAT TACTTCAATA GCACATGGAA TTGAAGGCGA AGAAGGTTAT TTCCTTCCTC TTGACAGATC TTTTGACAGC TTTAATGCTT CTTTAGGATA TAAAACAAAA TTAGCTGAAC CATTAACGCT TCGTTTAAAT GTTGCTACTG GTTTTAGAGC ACCAAACTTA GCCGAATTAA CTTCAAACGG TGTTCACGAA GGAACAAATC GTTATGAAAT TGGAAATGCT AATTTGAAAA CTGAACAAAA CGTTCAGACT GATTTGAATT TAGAATACAA AAACACGCAC TTTGAATTCT TTGTAAACGG ATTTTACAAT CACGTAAACA ATTATATCTA TACTTCGCCA ACTGGAGAAG TTCGTGAGGA TAATGATGTT TTTGCTTATG TTCAGGATAA TGCAAAATTA TATGGTGGCG AAGTTGGTTT ACACTTTCAC CCGCATCCTT TAGACTGGTT ACATTTTGAG ACCAGTTTTG AAACGGTTAC AGGTAAAAAA GACAATGATG ATTATCTGCC GTTAATTCCG GCAAACAACT GGAACAATAC GCTTAGAACT GAATTTAACA TCAAAGACTG GTTAAGCGAA GGCTTTGCTT CTTTAAATGT TTCTTCGACT TTCAGCCAGG ATAATGTAAG CGGTTTTGAA ACAGCTTCTA AAGGGTATAC TTTGGTAAAT TTAGGTTTTG GAGGAACGGT AAAACTAGGA AAAACTGCTT TTGACATTAA CTTAAACGGA AACAATTTAT TCGACAAAAA ATATATTGCA CACCTTTCAA GATTAAAAAC TGACGGTATT CCGAACATTG GAAGAAACAT CGTTTTGGGA GTTAATTTTA ATTTATAA
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Protein sequence | MKKFIIALVL GFSGLLSAQN SVSGTVTDNQ NNPLPGVSVY APELHKGTTT DANGKYELNN LPNGSLRIAF TYVGYANQNK TIAKLLKQNT LDITLEESIL EMDEVVVSTP FNKLQSQNVM KIEHESIKTL QQKGTSTLIE GLATIPGVAQ ISTGTSIGKP VIRGLSGNRV LVYSQGVRIE NQQFGDEHGL GLNDAGIESV EVIKGPASLL YGSDALGGVL YFNPEKFADA GTFKANFSQK YFTNTQGSNS SIGLKTSTDN WKFLARGSYN THSDYKIADG DRVTNSRYNE TDFKTGIGYS NSSFSSVLRY NYNKLDIGIP EDGIAEQSSS KDTQFPRQGI FNHLLSLNNV IFFENSKLDV DLGYISNDRS EFEDSNEASL HMKLNTFNYN AKYHFPKFGK IETILGVQGM HQTNKNSGEE YLIPDATTND FGVFGTANYE WDNSVIQAGL RFDNRNITSI AHGIEGEEGY FLPLDRSFDS FNASLGYKTK LAEPLTLRLN VATGFRAPNL AELTSNGVHE GTNRYEIGNA NLKTEQNVQT DLNLEYKNTH FEFFVNGFYN HVNNYIYTSP TGEVREDNDV FAYVQDNAKL YGGEVGLHFH PHPLDWLHFE TSFETVTGKK DNDDYLPLIP ANNWNNTLRT EFNIKDWLSE GFASLNVSST FSQDNVSGFE TASKGYTLVN LGFGGTVKLG KTAFDINLNG NNLFDKKYIA HLSRLKTDGI PNIGRNIVLG VNFNL
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