| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1304 |
|---|
| Symbol | |
|---|
| ID | 5094008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 1486586 |
|---|
| End bp | 1487641 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644740707 |
|---|
| Product | 3-isopropylmalate dehydrogenase |
|---|
| Protein accession | YP_001193655 |
|---|
| Protein GI | 146299064 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAA ACATAGCCCT TTTAGCCGGC GACGGAATCG GACCAGAAGT AATAAATGAA
GCTGTAAAAG TATCTGATGC TGTTGCAAAA AAATTCGGAC ATGAAATTAC ATGGAAACCG
GCTTTAACTG GAGCAGCTGC AATTGATGCA GTTGGAGAAC CTTATCCAGA TGCAACACAC
GAAATTTGTA AAAATGCTGA TGCGGTTCTT TTTGGAGCAA TCGGCCACCC AAAATACGAT
AACGATCCTT CTGCACCAGT ACGCCCAGAG CAAGGTTTAT TAAAAATGCG TAAAGCTTTA
GGTTTGTTCG CAAACGTAAG ACCAACTTTT ACATTCCCAT CTTTATTAGA TAAATCGCCG
CTAAAAAGAG AAAGAATTGA AGGAACTGAT TTAGTTTTCT TAAGAGAATT AACTGGAGGT
ATTTACTTTG GTGAAAAAGG AAGAAAAGAC AACGGAGACA CAGCTTACGA CAACTGTGTT
TACACAAGAG CCGAAGTACA GCGTTTAGCT AAAAAAGGTT TCGAATTAGC AATGACTCGT
TCCAAAAAAT TATGCTGCGT TGATAAAGCA AACGTTTTGG AAACTTCACG TTTATGGAGA
GAAACGGTTC AGGCAATGGA AAAAGATTAT CCAGAGGTTG AAGTCAGCTA CGAATTTGTT
GATGCGGTTG CAATGCGTTT GGTTCAATGG CCAAATTCTT ATGACGTATT AATTACTGAA
AACTTATTTG GAGATATCTT AACTGACGAA GCTTCTGTAA TTTCTGGTTC AATGGGATTA
ATGCCTTCTG CTTCTATGGG AGCTGAAGTA TCTTTATTCG AACCTATTCA CGGATCTTAT
CCACAAGCTA CAGGATTAAA CATAGCAAAC CCAATGGCTA CTATTTTATC TGCTGCTATG
ATGTTCGAAA ACTTCGGATT AATGGAAGAA GGGAAAGCAA TGAGAGATGC TGTAAACAAG
GCTTTAGAAG CTGGAGTAGT TACTGAAGAT TTAGCTAACG GAGGTAAAGC ATACGGCACT
AAAGAAGTTG GTGACTGGTT AGCTGCGAAT GTATAA
|
|---|
| Protein sequence | MKLNIALLAG DGIGPEVINE AVKVSDAVAK KFGHEITWKP ALTGAAAIDA VGEPYPDATH
EICKNADAVL FGAIGHPKYD NDPSAPVRPE QGLLKMRKAL GLFANVRPTF TFPSLLDKSP
LKRERIEGTD LVFLRELTGG IYFGEKGRKD NGDTAYDNCV YTRAEVQRLA KKGFELAMTR
SKKLCCVDKA NVLETSRLWR ETVQAMEKDY PEVEVSYEFV DAVAMRLVQW PNSYDVLITE
NLFGDILTDE ASVISGSMGL MPSASMGAEV SLFEPIHGSY PQATGLNIAN PMATILSAAM
MFENFGLMEE GKAMRDAVNK ALEAGVVTED LANGGKAYGT KEVGDWLAAN V
|
|---|
| |