Gene Fjoh_1301 details

Gene Information

• Locus tag: Fjoh_1301
• Symbol: rpsP
• ID: 5094005
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: -
• Start bp: 1484713
• End bp: 1485279
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 644740704
• Product: 30S ribosomal protein S16
• Protein accession: YP_001193652
• Protein GI: 146299061
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0228] Ribosomal protein S16
• TIGRFAM ID: [TIGR00002] ribosomal protein S16

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGTAA AAATTAGATT ACAAAGACAC GGTAAAAAAG GAAAACCTTT TTACTGGGTA 
GTAGCTGCAG ATGCACGCTC AAAAAGAGAT GGTAAATACT TAGAAAAAAT CGGTACTTAC 
AATCCAAACA CAAACCCAGC AACTGTTGAG TTAAACCTTG ACAGCGCAGT TAAATGGTTA 
CACAATGGTG CTCAGCCAAC TGATACTGCA AGAGCTATCC TTTCTTATAA AGGTGCTTTA 
TTGAAACACC ACCTTGATGG AGGAGTTCGT AAAGGAGCTT TAACTCAAGA ACAAGCTGAT 
GCTAAATTAA CTGCATGGTT AGAAGCTAAA GCTGGAAAAG TTGATGCTAA AAAAGATGGT 
TTATCAAAAG CACAAGCTGA TGCTAAAGCT AAAGCTTTAA AAGCTGAAAA AGAAGTTAAC 
GATAAGCGTA TCGCTGCTGC TGCAAAAGCT GAAGCTGATG CTATCGCTGC TGCATCTGCA 
ACTGAAGAAG CTGCGACTGA AGAAGTTGCT GAAGCTGCTG AAGAAGCACC TGCTGCTGAA 
GAGAATAACG AAACAACTGA AGCATAA 

 

Protein sequence

MSVKIRLQRH GKKGKPFYWV VAADARSKRD GKYLEKIGTY NPNTNPATVE LNLDSAVKWL 
HNGAQPTDTA RAILSYKGAL LKHHLDGGVR KGALTQEQAD AKLTAWLEAK AGKVDAKKDG 
LSKAQADAKA KALKAEKEVN DKRIAAAAKA EADAIAAASA TEEAATEEVA EAAEEAPAAE 
ENNETTEA