Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1267 |
Symbol | |
ID | 5093971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 1443960 |
End bp | 1445027 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644740669 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001193618 |
Protein GI | 146299027 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA TAATTATAAC AATCGTGATC ATAGCCGTAG CTTTTTTCGG GATAAGCTAT ATCTTAAATA AAAATAAAGC AGAAAACGAA GGTAAAACTG CTATCGTAGC CGAAAAAAAT GCTGCAGTAT CTGTAAAAGT AGCCACTGTT AAAACAGAAG ATGTTAATCT TGGTTTTACT GCAAATGGAA ACTTTGTGCC AATTCAGGAA TTAACTTTCT CTGCTGAAAA ATCTGGAAAA GTAATCAGTG TTTTAGCCAA AGAAGGTGAT TATGTAAGAG TAGGACAGAC ATTACTAACA GTAAGAGGTG ATGTTATTAA TGTAAATGCT CAGCAGGCTC AGGCTGTTTA TCAAAATGCA AAATCTGATT ACGAAAGATA TGAAAACGCT TTTAAAACAG GCGGTGTAAC AAAACAACAA TTAGATCAGG CAAAATTAGC TTTGACAAAT GCACAATCTA ACTTAACACA AGCTAATATC AACGTTGGAG ATACTAAAGT AAAAGCTCCA ATTAACGGAT ACATCAATAA AAAATATATT GAACCGGGAT CTATTTTAGC AGGAATGCCG GCAACAGCTT TGTTTGATAT CGTAAACGTT TCTAAATTAA AATTAACTGT TACAGTAAAC GAAAGCCAGG TTGCAAGCTT AAAATTAGGA AACTCAGTGA GCATTACTGC TAGTGTTTAT CCTGATAAAA CATTCTCTGG AAAAATTACT TTCATCGCTG CAAAAGCAGA TGCTTCATTA AACTTCCCTG TTGAAATCGA AATTACAAAC AATGCTAATA ATGACTTAAA AGCAGGTATG TACGGAACAG CAAACTTTGG TTCAAACAAC CAAAAACAAA ACTTAAAAGT GGTTCCTAGA AATGCATTTG TTGGAAGTGT AAGCAGTAAC GAAATTTTCG TAGTTGAAAA TAATGTAGCA AAATTGAAAA AAGTTGTTGC AGGAAGAATT TTAGGAGATA AAGTTGAAAT CATCAATGGT TTAAATGACG GAGACGTAGT AATTATTACA GGTCAGATCA ACTTACAAGA CGGAAATACA GTAGAAATTA TTAAATAA
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Protein sequence | MKKIIITIVI IAVAFFGISY ILNKNKAENE GKTAIVAEKN AAVSVKVATV KTEDVNLGFT ANGNFVPIQE LTFSAEKSGK VISVLAKEGD YVRVGQTLLT VRGDVINVNA QQAQAVYQNA KSDYERYENA FKTGGVTKQQ LDQAKLALTN AQSNLTQANI NVGDTKVKAP INGYINKKYI EPGSILAGMP ATALFDIVNV SKLKLTVTVN ESQVASLKLG NSVSITASVY PDKTFSGKIT FIAAKADASL NFPVEIEITN NANNDLKAGM YGTANFGSNN QKQNLKVVPR NAFVGSVSSN EIFVVENNVA KLKKVVAGRI LGDKVEIING LNDGDVVIIT GQINLQDGNT VEIIK
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