Gene Fjoh_1267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1267 
Symbol 
ID5093971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1443960 
End bp1445027 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content33% 
IMG OID644740669 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_001193618 
Protein GI146299027 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA TAATTATAAC AATCGTGATC ATAGCCGTAG CTTTTTTCGG GATAAGCTAT 
ATCTTAAATA AAAATAAAGC AGAAAACGAA GGTAAAACTG CTATCGTAGC CGAAAAAAAT
GCTGCAGTAT CTGTAAAAGT AGCCACTGTT AAAACAGAAG ATGTTAATCT TGGTTTTACT
GCAAATGGAA ACTTTGTGCC AATTCAGGAA TTAACTTTCT CTGCTGAAAA ATCTGGAAAA
GTAATCAGTG TTTTAGCCAA AGAAGGTGAT TATGTAAGAG TAGGACAGAC ATTACTAACA
GTAAGAGGTG ATGTTATTAA TGTAAATGCT CAGCAGGCTC AGGCTGTTTA TCAAAATGCA
AAATCTGATT ACGAAAGATA TGAAAACGCT TTTAAAACAG GCGGTGTAAC AAAACAACAA
TTAGATCAGG CAAAATTAGC TTTGACAAAT GCACAATCTA ACTTAACACA AGCTAATATC
AACGTTGGAG ATACTAAAGT AAAAGCTCCA ATTAACGGAT ACATCAATAA AAAATATATT
GAACCGGGAT CTATTTTAGC AGGAATGCCG GCAACAGCTT TGTTTGATAT CGTAAACGTT
TCTAAATTAA AATTAACTGT TACAGTAAAC GAAAGCCAGG TTGCAAGCTT AAAATTAGGA
AACTCAGTGA GCATTACTGC TAGTGTTTAT CCTGATAAAA CATTCTCTGG AAAAATTACT
TTCATCGCTG CAAAAGCAGA TGCTTCATTA AACTTCCCTG TTGAAATCGA AATTACAAAC
AATGCTAATA ATGACTTAAA AGCAGGTATG TACGGAACAG CAAACTTTGG TTCAAACAAC
CAAAAACAAA ACTTAAAAGT GGTTCCTAGA AATGCATTTG TTGGAAGTGT AAGCAGTAAC
GAAATTTTCG TAGTTGAAAA TAATGTAGCA AAATTGAAAA AAGTTGTTGC AGGAAGAATT
TTAGGAGATA AAGTTGAAAT CATCAATGGT TTAAATGACG GAGACGTAGT AATTATTACA
GGTCAGATCA ACTTACAAGA CGGAAATACA GTAGAAATTA TTAAATAA
 
Protein sequence
MKKIIITIVI IAVAFFGISY ILNKNKAENE GKTAIVAEKN AAVSVKVATV KTEDVNLGFT 
ANGNFVPIQE LTFSAEKSGK VISVLAKEGD YVRVGQTLLT VRGDVINVNA QQAQAVYQNA
KSDYERYENA FKTGGVTKQQ LDQAKLALTN AQSNLTQANI NVGDTKVKAP INGYINKKYI
EPGSILAGMP ATALFDIVNV SKLKLTVTVN ESQVASLKLG NSVSITASVY PDKTFSGKIT
FIAAKADASL NFPVEIEITN NANNDLKAGM YGTANFGSNN QKQNLKVVPR NAFVGSVSSN
EIFVVENNVA KLKKVVAGRI LGDKVEIING LNDGDVVIIT GQINLQDGNT VEIIK