Gene Fjoh_1261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1261 
Symbol 
ID5093965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1436842 
End bp1438062 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content34% 
IMG OID644740663 
Productmajor facilitator transporter 
Protein accessionYP_001193612 
Protein GI146299021 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA TAGGAATTAA AATCTCACTT TACCTCAATT ATTTTGTCTT TGCTATTTTA 
TTAAACAGCG TAGGAATTGT GATTTTAAAA TCGCAGAAAA ATTATGGAGT CGACGAGGTT
CAGGCGAGTA TTTTAGAAGC CTTTAAAGAT ATGCCAATTG CCATTGTATC CTTTTTTATA
GCTTCTTTTC TGCCCCGAAT AGGTTATAGA AAAGCGATGT TAACAGGATT GGCTTTGGTT
ACTTTGGCGT GTATTTCTAT GTATTTTGGA AACTCATTTA ACAATGCTAA AATCCTTTTT
GCAACCGTTG GAGTTTCATT TGCTCTGATT AAAGTTTCTG TTTATTCGTT AATAGGAACC
GTAACCGAAA CCAAAAAAGA GCACAATGCT TTAATGAGCA GTATCGAAGG TTTTTTTATG
GTAGGAATTG CGCTGGCTTA TTTTTTATTT CCGGCTTTTA ATAACGAAAA TGATCCCAAT
TCATGGCTTA ATGTATATTG GTTATTGGCA GGATTATCGT TTTTATCGTT TTTGTTTTTA
CTCTTTATAA AATTTGAAGA AACAGAAGTC GCAGCAGGAG CAAACCTTAA AGATGATTTT
TTGCAGATGT TCAAATTAAT GGCAAAACTG CTGACCGTTA TTTTTGTCAT CAGCGTGTTT
TTATTTGTAA TGATCGAGCA GGGAATACTT TCTTGGCTGC CTACATTTAA TACAAAAGTG
CTGCATCTGC CTGAAAACAT CAGCATTATG ATGGCCAGTA TTTTGGCAGT TTCATTAGCA
ATTGGAAGAC TTATAGCAGG AATTGTAACT AAAAAAATAA ACTGGATTTG GGTTTTAAGT
TTCTGCATTG TTTCAGCCAT GCTTTTGGTA ACATTTGTGC TTCCAAAAAC GGTTGGATTA
GAAGTGAAAA ATATTGATAC ACTTTCAGAT ATACCATTAA TTGGTTTTGC ATTTCCTTTA
ATCGGATTGT TTATTGCGCC CATTTATCCA TTGTTAAATT CAATTGTATT AAGTGCTTTA
CCAAAGAATC TGCAAAGTTC CATGACCGGA TTAATTGTCA TTTTTTCGGC TCTTGGCGGC
ACATTGGGGT CCAGAATTAC AGGCTGGCTT TTTAAAAATG AAGGTCCGGA AAAGGCTTTT
TATTTTACCC TCATTCCAAT GACTTTGTTA CTGATCTCCT TTTTTATTCT TAAAAAAATA
ACTGCAAAAG ATGAAATTTA A
 
Protein sequence
MKNIGIKISL YLNYFVFAIL LNSVGIVILK SQKNYGVDEV QASILEAFKD MPIAIVSFFI 
ASFLPRIGYR KAMLTGLALV TLACISMYFG NSFNNAKILF ATVGVSFALI KVSVYSLIGT
VTETKKEHNA LMSSIEGFFM VGIALAYFLF PAFNNENDPN SWLNVYWLLA GLSFLSFLFL
LFIKFEETEV AAGANLKDDF LQMFKLMAKL LTVIFVISVF LFVMIEQGIL SWLPTFNTKV
LHLPENISIM MASILAVSLA IGRLIAGIVT KKINWIWVLS FCIVSAMLLV TFVLPKTVGL
EVKNIDTLSD IPLIGFAFPL IGLFIAPIYP LLNSIVLSAL PKNLQSSMTG LIVIFSALGG
TLGSRITGWL FKNEGPEKAF YFTLIPMTLL LISFFILKKI TAKDEI