| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1249 |
|---|
| Symbol | |
|---|
| ID | 5090049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 1422285 |
|---|
| End bp | 1423280 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 644740651 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_001193600 |
|---|
| Protein GI | 146299009 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.768567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TTTTTGTTAC GGGTCTGTTG ATTTTTAGTG CTTTGAATGT TATAGGTCAA
GCCAAAAATC AAATAAAATT TACAGCTAAA ATCGATAATA GAAACAGCGA TACTTTAGTT
ATTAAAGGAA GAAATAATTT TAAACAAGTT ATTCCAATTG ACAAAAAGGG AATTTTTGCT
GCAACTTTTG AAGCTCCAAA AGGATTTTAT ATGTTTTCTG ACGGAACTGA ATCTTCAAAC
ATTTACTTAA AACCAGATTC TGAAGTTAAT TTAACGATGA ATGCCAAAGA ATTTGATGAA
ACAATTGTTT ATAAAGGTAA AGGTGTAAAC GAAAGTAATT TCCTTGCACA GCAATCTTTA
AAAGATGAAA AATTTCAGAA TGAAGCATTT GCTAAAGAAG CAGCTGAATT TACATCGCTT
TTAGAAAACA AGAAAAAAAC TGATTTTGAG AATCTGGAAA AAAGTGATCT TGATCCGGAA
TTTAAAACTG CTTTAAAAAT GAGTTTTGAA AGTTTTAATC AATATGCAGT TCAGGAATAT
GAAAGAACTG CAAATGCAAG AAAAATGGTT GGAAAACCTT CTCCTCAATT TGATTACGAA
AACTTTAAAG GAGGAAAAAC AAAACTTTCA GATCTAAAAG GAAAATACGT TTATATTGAT
CTTTGGGCAA CCTGGTGCGC GCCTTGCAGA GCAGAGATTC CATATTTGCA AAAAATTGAA
GAAAAGTATC ACGGAAAAAA CATCGAGTTC GTGAGTATTT CTATTGATAA AGCAAAAGAC
AATGAAAAAT GGAAAAAGTT TGTGACTGAT AAAAAATTAG GAGGCGTTCA GTTATTTGCA
GATAAAGACT GGGAATCTGA ATTCGTAGTC AATTATGGTG TAATGGGAAT TCCAAGATTT
ATTCTTTTAG ACCCAAATGG CAACATTGTA AGTTCTGATG CTACAAGACC CTCTGATCCA
AAGCTTCAGG ATCAGTTAAA CACTTTATTG AACTAA
|
|---|
| Protein sequence | MKKLFVTGLL IFSALNVIGQ AKNQIKFTAK IDNRNSDTLV IKGRNNFKQV IPIDKKGIFA
ATFEAPKGFY MFSDGTESSN IYLKPDSEVN LTMNAKEFDE TIVYKGKGVN ESNFLAQQSL
KDEKFQNEAF AKEAAEFTSL LENKKKTDFE NLEKSDLDPE FKTALKMSFE SFNQYAVQEY
ERTANARKMV GKPSPQFDYE NFKGGKTKLS DLKGKYVYID LWATWCAPCR AEIPYLQKIE
EKYHGKNIEF VSISIDKAKD NEKWKKFVTD KKLGGVQLFA DKDWESEFVV NYGVMGIPRF
ILLDPNGNIV SSDATRPSDP KLQDQLNTLL N
|
|---|
| |