| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1235 |
|---|
| Symbol | |
|---|
| ID | 5090035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 1409182 |
|---|
| End bp | 1411065 |
|---|
| Gene Length | 1884 bp |
|---|
| Protein Length | 627 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644740637 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| Protein accession | YP_001193586 |
|---|
| Protein GI | 146298995 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCA ATTTAGCTTT ACTTTTAGTA TTAACTCCTT TTTTAGGATT TTTAATTAAT
GTTTTCTTTG GGAAAAGCTT AGGAAAAACA GTTTCTGGAT TTATCGGAAC TGCTGCCGTA
GCGATTTCTT TTATAGTTAC TCTTGTACTT TTTAATCAAA TAACTTCTAC CGGAAAAGGA
ATTGAAGTTA CTTTATTTGA CTGGATTCAG ATTAGTAACT TAACAATCAA TCTTGGATTT
TTATTAGATC AGTTATCTGT TCTTTGGTTA TTGTTCGTAA CCGGAATTGG ATCTTTGATT
CACTTATACT CTATCAGTTA CATGCATGAT GACGAAAACA TGCACAAATT CTTCTCTTAC
CTGAATTTGT TCGTTTTCTT CATGATCACA CTTGTAATTG GAAGCAACTT ATTAGTATTA
TTTATCGGTT GGGAAGGTGT TGGACTTTGC TCTTATTTAT TGATCGGGTT CTGGCATAAA
AACCAGGATT ACAACGATGC GGCAAAAAAG GCTTTCATCA TGAACAGAAT TGGAGATTTA
GGTCTTTTAA TCGGAATGTT CATCATCGGT TCAATGTTCT CTACTTTAGA TTATGCAACT
TTAAAAACAG CAATTGCCGG AGCTGCTAAC TTAGATGTTT CATTACTTTC TTTAGCTGCT
TTATGTTTGT TTATTGGAGC TTGTGGTAAA TCTGCTCAAA TTCCGTTATA CACTTGGCTG
CCAGATGCGA TGGCGGGACC AACTCCTGTT TCAGCTTTGA TTCACGCTGC AACGATGGTT
ACAGCTGGTA TTTTCATGGT AACAAGATTA AACTTTGTTT TTGATTTAGC TGTTGACGTT
CAAACTGTAA TTGCAGTTAT TGGCGCCATA ACTTCTTTAG TTGCTGCTAC GATTGGTTTA
GTACAAAACG ACATCAAAAA AGTATTAGCT TACTCTACAG TTTCTCAATT AGGTTTAATG
TTTTTGGCAT TAGGATTTGG AGCTTATGAA GTAGCGGTTT TCCACGTAAT CACACATGCT
TTCTTTAAAG CTTGTTTATT CTTAGGTTCT GGTTCTGTAA TTCACGGATT ACACGGAGAG
CAGGATATGC GTAACATGGG TGGATTGCGT AAAGCAATGC CAATTACGTT TTGGACTATG
CTGATTTCTT CATTGGCAAT CTCAGGAGTT CCGTTTTTCT CTGGATTCTT TTCAAAAGAT
GAAATTTTAT TGACTGCTTT CCACCACAGT ATTCCATTAT ACGTTGTTGG ATCTGTAGCT
TCAATCATGA CGGCTTTCTA TATGTTTAGA TTAATGTTCT TAACTTTCTT CAAAGAATTT
AGAGGAACTG AAGAGCAAAA ACATCATTTA CACGAAAGCG GTTCATTAAT TACTATTCCG
CTTATCATCT TAGCTATTTT AGCAGCTTTT GGCGGATTAA TCAGTTTACC TGGAAACAGC
TGGTTAAATG AATATCTTGC TCCTCTTTTC ACTAAAGCGG CTGGCGAAGA ACATCATTTA
GGTTCAACAG AATATACTTT AATGGGTGTA GCTGTATTAG GCGGATTGTT AGGTATTTTA
ATTGCTTACG TTAAATACTT TAAACAAGAT AATGTTCCTG AAACAGATGA AAACATTACA
GGCTTAACAA AAGTGTTGTA TAACAAATAT TATGTAGATG AAGCTTACGA TGCGATTTTT
GTTCGCCCGG TAAATGCATT ATCAAGATTC TTTAGAGACT ATATTGAAAC GGGATTATCG
GCAGTTGTTT TTGGATTAGG AAAAGCAGCA AACGAATTAG CGTTTCAGGG TAAAAAACTT
CAAACCGGAA GTATCGGATT ATATCTTTTC GCTTTCGTTT TAGGTCTTTG CGCCATTGTT
TCTTATATAT TTTTAGCTCA ATAA
|
|---|
| Protein sequence | MDTNLALLLV LTPFLGFLIN VFFGKSLGKT VSGFIGTAAV AISFIVTLVL FNQITSTGKG
IEVTLFDWIQ ISNLTINLGF LLDQLSVLWL LFVTGIGSLI HLYSISYMHD DENMHKFFSY
LNLFVFFMIT LVIGSNLLVL FIGWEGVGLC SYLLIGFWHK NQDYNDAAKK AFIMNRIGDL
GLLIGMFIIG SMFSTLDYAT LKTAIAGAAN LDVSLLSLAA LCLFIGACGK SAQIPLYTWL
PDAMAGPTPV SALIHAATMV TAGIFMVTRL NFVFDLAVDV QTVIAVIGAI TSLVAATIGL
VQNDIKKVLA YSTVSQLGLM FLALGFGAYE VAVFHVITHA FFKACLFLGS GSVIHGLHGE
QDMRNMGGLR KAMPITFWTM LISSLAISGV PFFSGFFSKD EILLTAFHHS IPLYVVGSVA
SIMTAFYMFR LMFLTFFKEF RGTEEQKHHL HESGSLITIP LIILAILAAF GGLISLPGNS
WLNEYLAPLF TKAAGEEHHL GSTEYTLMGV AVLGGLLGIL IAYVKYFKQD NVPETDENIT
GLTKVLYNKY YVDEAYDAIF VRPVNALSRF FRDYIETGLS AVVFGLGKAA NELAFQGKKL
QTGSIGLYLF AFVLGLCAIV SYIFLAQ
|
|---|
| |