Gene Fjoh_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1180 
Symbol 
ID5089725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1332893 
End bp1334209 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content34% 
IMG OID644740582 
ProductFeS assembly protein SufD 
Protein accessionYP_001193531 
Protein GI146298940 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01981] FeS assembly protein SufD, group 1 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTAA AAGAAAAATT AGTATCGTCT TTTATGGCTT TTGAAGAGCG TGTCGATGTA 
CATTCAGATT TACATGACAT ACGCACAAAT GCTTTAAAAA ACTTCGAAAA TAAAGGTTTC
CCAACCAAAA AAGAAGAAGC TTGGAAATAT ACATCGCTAA ATGCCATCTT AAAAAATGAC
TTTACGGTTT TTCCTAAGCA GGAAAATGCA ATCGAATTCA ATCAGGTAAA AAAATACTTT
TTACACGAAA TTGATACTTA CAAATTAGTA TTTATCGATG GCGTTTTCAG TTCGCATTTG
TCTTCTACAA CGCATGACGG AATCGATGTT TGCTTGATGT CATCGGCATT GACCAAACCA
AAATATAAAA TGGTTATTGA TACCTATTTC AACCAAATTG CAAGTAAAGA TGACAGCTTG
ACCTCATTGA ATACTGCTTT TGCAATTGAA GGTGCTTTTA TCAATATTCC GAAGAAAAAA
GTGGCTGACA AACCAATTGA GATTATGTAT TTCTCAACAG GAAATGAAGC TGCATTAATG
GTTCAGCCAA GAAATTTGGT TATTGTGGGT GAAAATTCAC ATGTTCAAAT TATCGAGCGT
CACCAAAGTT TGAACGAAAA TCCAGTTTTA ACAAACTCTG TTACTGAGAT TTTTGCTCAA
AAACGTGCCA TTGTTGATTA TTATAAAATT CAAAATGATA ATAACGAAGC GAATTTAATT
GACAACACTT ACGTTTCACA ACAACAAGAA AGTCACGCTT CTGTTCATAC ATTCTCATTC
GGAGGAAACT TGACACGTAA CAATTTAAAC TTTTACCACT ACGGAGAAAG ATTAACAAGT
ACGTTAAACG GAATTTCGAT CTTAAATGAC AAACAACACG TTGATCACTA TACTTTGGTA
AACCACGCAC AACCAAACTG CGAAAGTTTC CAAGATTATA AAGGAATTTT TTCTGATCGT
TCAACAGGAG TTTTCAACGG AAAAGTTTTG GTAGAAAAAG AAGCTCAAAA AACAAATGCT
TTCCAAAAAA GCAACAACAT TTTGTTGAGT GATAAAGCTA CAATCAACGC AAAACCTCAA
TTAGAGATTT TCGCTGATGA CGTAAAATGT TCTCACGGAT GTACAGTTGG ACAATTGGAT
GAAACAGCAA TGTTCTACAT GCAGTCACGC GGAATCCCGA AAAAAGAAGC TAAAGCTTTA
TTGATGTACG CATTCTCAAA TGCCGTTATC GAAAGCATCA AAATACCTGA ATTAAAACAA
AGAATTACTA AAATCATTGC TACGAAATTG GGCGTGAATT TAGGATTTGA TTTGTAG
 
Protein sequence
MDLKEKLVSS FMAFEERVDV HSDLHDIRTN ALKNFENKGF PTKKEEAWKY TSLNAILKND 
FTVFPKQENA IEFNQVKKYF LHEIDTYKLV FIDGVFSSHL SSTTHDGIDV CLMSSALTKP
KYKMVIDTYF NQIASKDDSL TSLNTAFAIE GAFINIPKKK VADKPIEIMY FSTGNEAALM
VQPRNLVIVG ENSHVQIIER HQSLNENPVL TNSVTEIFAQ KRAIVDYYKI QNDNNEANLI
DNTYVSQQQE SHASVHTFSF GGNLTRNNLN FYHYGERLTS TLNGISILND KQHVDHYTLV
NHAQPNCESF QDYKGIFSDR STGVFNGKVL VEKEAQKTNA FQKSNNILLS DKATINAKPQ
LEIFADDVKC SHGCTVGQLD ETAMFYMQSR GIPKKEAKAL LMYAFSNAVI ESIKIPELKQ
RITKIIATKL GVNLGFDL