Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1180 |
Symbol | |
ID | 5089725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 1332893 |
End bp | 1334209 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644740582 |
Product | FeS assembly protein SufD |
Protein accession | YP_001193531 |
Protein GI | 146298940 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTAA AAGAAAAATT AGTATCGTCT TTTATGGCTT TTGAAGAGCG TGTCGATGTA CATTCAGATT TACATGACAT ACGCACAAAT GCTTTAAAAA ACTTCGAAAA TAAAGGTTTC CCAACCAAAA AAGAAGAAGC TTGGAAATAT ACATCGCTAA ATGCCATCTT AAAAAATGAC TTTACGGTTT TTCCTAAGCA GGAAAATGCA ATCGAATTCA ATCAGGTAAA AAAATACTTT TTACACGAAA TTGATACTTA CAAATTAGTA TTTATCGATG GCGTTTTCAG TTCGCATTTG TCTTCTACAA CGCATGACGG AATCGATGTT TGCTTGATGT CATCGGCATT GACCAAACCA AAATATAAAA TGGTTATTGA TACCTATTTC AACCAAATTG CAAGTAAAGA TGACAGCTTG ACCTCATTGA ATACTGCTTT TGCAATTGAA GGTGCTTTTA TCAATATTCC GAAGAAAAAA GTGGCTGACA AACCAATTGA GATTATGTAT TTCTCAACAG GAAATGAAGC TGCATTAATG GTTCAGCCAA GAAATTTGGT TATTGTGGGT GAAAATTCAC ATGTTCAAAT TATCGAGCGT CACCAAAGTT TGAACGAAAA TCCAGTTTTA ACAAACTCTG TTACTGAGAT TTTTGCTCAA AAACGTGCCA TTGTTGATTA TTATAAAATT CAAAATGATA ATAACGAAGC GAATTTAATT GACAACACTT ACGTTTCACA ACAACAAGAA AGTCACGCTT CTGTTCATAC ATTCTCATTC GGAGGAAACT TGACACGTAA CAATTTAAAC TTTTACCACT ACGGAGAAAG ATTAACAAGT ACGTTAAACG GAATTTCGAT CTTAAATGAC AAACAACACG TTGATCACTA TACTTTGGTA AACCACGCAC AACCAAACTG CGAAAGTTTC CAAGATTATA AAGGAATTTT TTCTGATCGT TCAACAGGAG TTTTCAACGG AAAAGTTTTG GTAGAAAAAG AAGCTCAAAA AACAAATGCT TTCCAAAAAA GCAACAACAT TTTGTTGAGT GATAAAGCTA CAATCAACGC AAAACCTCAA TTAGAGATTT TCGCTGATGA CGTAAAATGT TCTCACGGAT GTACAGTTGG ACAATTGGAT GAAACAGCAA TGTTCTACAT GCAGTCACGC GGAATCCCGA AAAAAGAAGC TAAAGCTTTA TTGATGTACG CATTCTCAAA TGCCGTTATC GAAAGCATCA AAATACCTGA ATTAAAACAA AGAATTACTA AAATCATTGC TACGAAATTG GGCGTGAATT TAGGATTTGA TTTGTAG
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Protein sequence | MDLKEKLVSS FMAFEERVDV HSDLHDIRTN ALKNFENKGF PTKKEEAWKY TSLNAILKND FTVFPKQENA IEFNQVKKYF LHEIDTYKLV FIDGVFSSHL SSTTHDGIDV CLMSSALTKP KYKMVIDTYF NQIASKDDSL TSLNTAFAIE GAFINIPKKK VADKPIEIMY FSTGNEAALM VQPRNLVIVG ENSHVQIIER HQSLNENPVL TNSVTEIFAQ KRAIVDYYKI QNDNNEANLI DNTYVSQQQE SHASVHTFSF GGNLTRNNLN FYHYGERLTS TLNGISILND KQHVDHYTLV NHAQPNCESF QDYKGIFSDR STGVFNGKVL VEKEAQKTNA FQKSNNILLS DKATINAKPQ LEIFADDVKC SHGCTVGQLD ETAMFYMQSR GIPKKEAKAL LMYAFSNAVI ESIKIPELKQ RITKIIATKL GVNLGFDL
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