Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1151 |
Symbol | |
ID | 5089697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 1300302 |
End bp | 1301099 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644740552 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001193503 |
Protein GI | 146298912 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGAAC TCGAAAAAGA GAAATACTTA GGCAATACCA AAAACAGTTT TGATACTGCG CAGGGAATTG CTGTGGTCGA GACTGAATAT CAAAACAAGG TTTACGAAGG CTGGCATTCG CACAATAATG CACATATAAC GCTTTTCTTA AAAGGCGGTA CGACCGAGAA AAGAAAAAAT TTCAGCGAAA CGGTTGGCGC GGGATCGCTG TTGTTTTATC ACAGCGACGA ACTGCATTTA AACCAAAATA CGCTTTTTCC TTCCCGAAAT ATTAATATTG AAATTGAAGA AAACCTCATC AAGGAACTTC AAATTTCCGA AGCTGTTATC GAAAAATCAA TTCAAAATGA AGCTTTTACC AAGTTTTTGA TTTTAAAGAT TTTTAAGGAA ACGCTTACCG CCGATACTTT TTCTGCTGAT ACAATTAAAA TGTTGTTCTC TCAGTTATCG AACGCCAATA CTCATTTGGA TCGATTTGAG AAAAGTCCGT TTTGGGTAAA AAGTTTAAAC GAATTATTAA ACGACTGCTG GAACGAGAAT CCCAATCTTC AGGATTTGGC ATTGGTTTTA AACCTCAACC CTATTACCAT TTCAAAGCAT TTCCCTAAAT ATTTTGGCTG CACATTGGGC GAATATATGC GCCGTATTAA AATTAATCGG TCGCTTTCGC TGATACAATC CAGTGAAAAT AATTTAACCG AAATTGCCCT CGAATGCGGA TTTGCTGATC AAAGTCATTT TATAAGAACT TTTAAAACGC AAACGGGATT TCTGCCAAAA CAGTTTCAAA AATTATAA
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Protein sequence | MYELEKEKYL GNTKNSFDTA QGIAVVETEY QNKVYEGWHS HNNAHITLFL KGGTTEKRKN FSETVGAGSL LFYHSDELHL NQNTLFPSRN INIEIEENLI KELQISEAVI EKSIQNEAFT KFLILKIFKE TLTADTFSAD TIKMLFSQLS NANTHLDRFE KSPFWVKSLN ELLNDCWNEN PNLQDLALVL NLNPITISKH FPKYFGCTLG EYMRRIKINR SLSLIQSSEN NLTEIALECG FADQSHFIRT FKTQTGFLPK QFQKL
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