Gene Fjoh_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1117 
Symbol 
ID5090195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1260988 
End bp1261677 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content31% 
IMG OID644740517 
ProductNUDIX hydrolase 
Protein accessionYP_001193469 
Protein GI146298878 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAACA GTTATAGCTC TGCCGATAAG GTTTTACTAG CGGTAGATTG TATTATTTTC 
GGATTCGACA GTGAAGGCCT AAAGATACTT TTAATTAAAA GGGATTTTGA ACCTGAAAAG
GGGAAATGGT CTTTGATTGG AGGTTTTTTA AAACGTGACG AAGTTTTAGA TGATGCTGCT
ATTAGAATTT TAAATACATA TACCGGTCTT AACGACATTT ATATGGAGCA GTTATATGCT
TACAGTGAAA TTGATCGTGA CCCGGTAGAA AGAACTATTT CGGTTTCGTA TTTTGCTTTA
ATTAATATTG AAAACCACAA TACAGAATTA ATTAGAAATT ATCATGCAGA ATGGTTCCCT
ATTAACGATG CTCCAAACCT AATTTTTGAC CACAACGAAA TGGTCGATAA TGCAATTAAA
AGACTTCGAT ACAAAACTTC GATAAAACCT ATTGGGTTCG AACTGCTTCC GGAAAAATTC
ACTATGCGCC AGCTTTTAGA ATTATACGAA GCTATTTTAA GCAAAGAATT AGATAAAAGA
AATTTCATCA GTAAAATAAA TTCTCTTGAA ATTCTAAATA AGCTTGAAGA AAAAGATATG
CAGTCGTCTA GAAAAGGATC TTACCTCTAT ACTTTTAATA AAGAAAAATA TGAAGAGAAA
CTTTTAAATA ATTTTTCTCT TAACTTATAA
 
Protein sequence
MLNSYSSADK VLLAVDCIIF GFDSEGLKIL LIKRDFEPEK GKWSLIGGFL KRDEVLDDAA 
IRILNTYTGL NDIYMEQLYA YSEIDRDPVE RTISVSYFAL INIENHNTEL IRNYHAEWFP
INDAPNLIFD HNEMVDNAIK RLRYKTSIKP IGFELLPEKF TMRQLLELYE AILSKELDKR
NFISKINSLE ILNKLEEKDM QSSRKGSYLY TFNKEKYEEK LLNNFSLNL