Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1107 |
Symbol | |
ID | 5090185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 1248466 |
End bp | 1249197 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644740507 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001193459 |
Protein GI | 146298868 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTGTG TATTAGTAAC AGGCGGTTCG AGAGGAATTG GAAGTGCTAT TTGTAAAAAA TTAGCCGTTG AATCTAATTA TCATATTCTG ATTAATTATC ATTCAAACAA AACTGCCGCC GAAGAAACAT TACAAGAAAT ACAAAAATTA GGCGCAACCG GAGAAATTTT AGGTTTTGAT GTTGCCAATT TTGAGCAGGT TCAAGACGTT CTTACACAAT GGCAGGAAGC AAATCCTGAA AAATTAGTAG AAGCGATTGT AAATAATGCC GGAATTACAA AAGATGGTCT TTTTATGTGG ATGACACCGC AGGACTGGAA CAGTGTTATG AATACAAGTG CAAACGGATT TTTTAATGTA ACGCAGTTTT TTATTCAAAA AATGCTTCGC AATAAATATG GCCGAATTGT AAATGTTGTA TCAGTATCTG GTGTAAAAGG AACTGCAGGA CAAACCAATT ATTCAGCAGC AAAAGGTGCT ATTGTTGCTG CAACAAAAGC ATTGGCACAA GAAGTAGCAA AACGTAACAT TACAGTAAAT GCTGTTGCAC CGGGTTTTAT TAAAACCGAT ATGACAAGTG AACTGGATGA AAAAGAATTA TTAAAACTGA TTCCAGTAAA TCGTTTTGGC GAAGCCGAAG AAGTAGCAGA TTTGGTAAGC TTTTTGATTT CAAAAAAATC AAGTTACATT ACCGGAGAAA TTATTAATAT AAATGGCGGA ATATATTCTT AA
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Protein sequence | MKCVLVTGGS RGIGSAICKK LAVESNYHIL INYHSNKTAA EETLQEIQKL GATGEILGFD VANFEQVQDV LTQWQEANPE KLVEAIVNNA GITKDGLFMW MTPQDWNSVM NTSANGFFNV TQFFIQKMLR NKYGRIVNVV SVSGVKGTAG QTNYSAAKGA IVAATKALAQ EVAKRNITVN AVAPGFIKTD MTSELDEKEL LKLIPVNRFG EAEEVADLVS FLISKKSSYI TGEIININGG IYS
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