Gene Fjoh_1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1096 
Symbol 
ID5090174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1240204 
End bp1240956 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content36% 
IMG OID644740496 
ProductABC transporter related 
Protein accessionYP_001193448 
Protein GI146298857 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGCCTA TAATTAAAAT AGAATCCCTT TCGAAAAAGT ACAAAGAAGC CGATCAGTAT 
TCTTTGAACG ATGTTTCGCT GGATATAAAC GAAGGAGAAG TTTTTGGTTT ATTAGGTCCA
AACGGTGCCG GAAAAACAAC CCTGATTTCA ATGCTCTGCG GATTGGTAAA ACCAACATCC
GGGCATTTTA CCATAAATGG TTTAGACTAT CAGCACCATT CTTCAAAAAT TAAAAAAATC
ATAGGCGTTG TTCCTCAGGA ATATGCCTTA TACCCTACTC TTACAGCGAG AGAAAACCTG
CATTATTTTG GAAGTATGTA CGGTTTAAAA GGTTCAGATT TAAAAGATAA AGTAGTCGAA
ACTTTAGACC TTTTGGGATT ATTAAAATTT GCCGACAAAC CTGTTGGAAC TTTTTCCGGC
GGAATGAAAC GCCGTGTGAA TTTGATTGCC GGAATTCTTC ATAATCCAAA AGTTTTATTT
TTAGACGAAC CAACTGTTGG AGTTGATGTA CAGTCTAAAA ATGCTATTAT GGATTATTTA
AAAGTATTAA ACCAAAACGG AACCTCTATT ATTTATACTT CGCATCATTT AGCTGAAGCC
GAAGATTTCT GCAGCACGAT TGCGATTATT GACAGAGGTC AGATTTATAC AAAAGGAACA
CCTTCAACCT TAATTAATTC TGTTAAAGAT GCCCGCAATC TCGAAGACGT TTTTATTTCA
TTAACCGGTA AAGACTTGAG AGATGCTATA TAA
 
Protein sequence
MQPIIKIESL SKKYKEADQY SLNDVSLDIN EGEVFGLLGP NGAGKTTLIS MLCGLVKPTS 
GHFTINGLDY QHHSSKIKKI IGVVPQEYAL YPTLTARENL HYFGSMYGLK GSDLKDKVVE
TLDLLGLLKF ADKPVGTFSG GMKRRVNLIA GILHNPKVLF LDEPTVGVDV QSKNAIMDYL
KVLNQNGTSI IYTSHHLAEA EDFCSTIAII DRGQIYTKGT PSTLINSVKD ARNLEDVFIS
LTGKDLRDAI