Gene Fjoh_1085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1085 
Symbol 
ID5091815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand- 
Start bp1230563 
End bp1231189 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content31% 
IMG OID644740485 
Productouter membrane lipoprotein carrier protein LolA 
Protein accessionYP_001193437 
Protein GI146298846 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2834] Outer membrane lipoprotein-sorting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTA AAATAGCTCT ACTAATTCTA TTTATTTCAG GCGGTTTGTT TGCTCAGGAA 
CAAAAAATGA CCGCTGCCGA AATAGCACAA TTTAAAGAAG ACGTAAATGT TGTATCTAAA 
AAAATCAAAA CCTTAAGTAC TGATTTTGTT CAGTACAAAC ATTTGGATTT TTTATCAAAA 
GATATTGAAA CTTCGGGAAA AATGGTTTTT AAAGAACCTT CGCTTTTGCA ATGGCAGTAT 
AAAAAACCAT ACAATTACAG TATTACTTTT AAAAACGGAA AAATCCTGAT TAACGACGAA 
GGAAAGAAAA GTGCAGTTGA TATGGGCGAC AGTAAAATTT TTGCCCGAAT CAATAAATTA 
ATCGTAGGAA GCGTGAGCGG TAATATGTTT GACGACAAAG AATTTACGAT TTCGTATTTT 
AAATTGAAAG GTCAGAACCT TGCTAAATTT ATTCCGAAAG ATGCAACGCT TAAAAAATAC 
ATTAAACAAA TTGAACTGAC TTTTGACAAG GAAGAAGCAA CTGTGGTTCA GGTAAAATTA 
TTAGAATCAT CTGAAGATTA TACCAGAATT GTACTTAAAA ATAAAGTAAT CAATGCAAAA 
ATCGACGATT CAGTTTTTAC TAATTAA
 
Protein sequence
MKTKIALLIL FISGGLFAQE QKMTAAEIAQ FKEDVNVVSK KIKTLSTDFV QYKHLDFLSK 
DIETSGKMVF KEPSLLQWQY KKPYNYSITF KNGKILINDE GKKSAVDMGD SKIFARINKL 
IVGSVSGNMF DDKEFTISYF KLKGQNLAKF IPKDATLKKY IKQIELTFDK EEATVVQVKL 
LESSEDYTRI VLKNKVINAK IDDSVFTN