Gene Fjoh_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1079 
Symbol 
ID5091809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1226627 
End bp1227814 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content33% 
IMG OID644740479 
Productglycosyl transferase family protein 
Protein accessionYP_001193431 
Protein GI146298840 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCTA TTATATCAAA GCAGGAATTG CTCGATTCAA CTTCTTTTTG TGTTATTGTT 
CCAACTTACA ATAACCAGAA AACATTAAAA AGAGTACTGG ATTCTATTTT AGATTTCACT
TCAAATGTCA TTATCGTAAA CGATGGTTCT ACAGACGAAA CCAGCGAGAT TTTAAAACAA
TATTCGCAGC TGACTCAAAT TCACCATCCT AAAAACTTAG GAAAAGGAAG AGCGCTGCGA
AATGGTTTTA GAAAAGCAAT TGAATTAAAT TTTGAATATG CCATTACGAT AGATTCTGAT
GGTCAGCATT TCGCTTCTGA TATTCCCATT TTTATTGAAG AAATTCAAAA AGAACCAAAT
TCGCTTTTAA TTGGAAGCCG AAACATGACT CAGGAAAATG TTCCTAAGAA AAGCAGTTTT
GGAAACAAAT TTTCGAATTT CTGGTTCAAG TTTGAAACCG GAATTGTTCT CGAAGATACA
CAATCAGGTT TTAGATTATA TCCCTTAAAA TTAATCCCAA AACGATTTTA TACCAATAAA
TTTGAGTTTG AAATCGAAGT CATAGTTCGT TCTGCCTGGA AAGGAATTGT TGTAAAAAAT
ATTCCAATTC AAATTTTGTA CGATCCGGCT GAACGCGTTT CACATTTCCG TCCTTTTAGA
GATTTTACCC GAATCAGTAT TTTAAATACC GTTTTGGTAA CTAATGCTTT ATTGTACATC
AAACCTCGCG ATTTTTTTAG GCGGGCAAAA AAAAAAGGTT TTAAAAAATT CTTCCTTGAA
GATATTTTAG AAAGCAATGA TTCTAATTTC AAAAAATCGG CTGCGATTGC TTTGGGAATT
TTTATCGGGA TTTCGCCTTT TTGGGGATTT CAAACTATCC TGCTTTTTAC TTTCGCTGCT
TTATTCAGGC TCAATAAAGT CATTGCTTTT TTGTCGTCAA ATGTGAGTTT TCCTCCCTTT
ATACCGCTTA TAATTTACGG TTCTTTAAAA ACCGGAAGCC TTTTTGTATC CAGTGATGCG
CCGTTAATTT TAGACAGTTC GGCCACACTC GACGATATTC AAAAAAATGC TGCTCAATAT
ATCGTTGGAA GTCTTATTTT AGCAACCGTT TTAGCACTAT CAGCAGGAGT AATAAGTTAT
TTGCTTTTAA CCACTTTTAG TTCTAAAAAT AAAACGAATA GTAAATAA
 
Protein sequence
MKPIISKQEL LDSTSFCVIV PTYNNQKTLK RVLDSILDFT SNVIIVNDGS TDETSEILKQ 
YSQLTQIHHP KNLGKGRALR NGFRKAIELN FEYAITIDSD GQHFASDIPI FIEEIQKEPN
SLLIGSRNMT QENVPKKSSF GNKFSNFWFK FETGIVLEDT QSGFRLYPLK LIPKRFYTNK
FEFEIEVIVR SAWKGIVVKN IPIQILYDPA ERVSHFRPFR DFTRISILNT VLVTNALLYI
KPRDFFRRAK KKGFKKFFLE DILESNDSNF KKSAAIALGI FIGISPFWGF QTILLFTFAA
LFRLNKVIAF LSSNVSFPPF IPLIIYGSLK TGSLFVSSDA PLILDSSATL DDIQKNAAQY
IVGSLILATV LALSAGVISY LLLTTFSSKN KTNSK