Gene Fjoh_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1062 
Symbol 
ID5091792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1205295 
End bp1206689 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content32% 
IMG OID644740462 
Productmulti anti extrusion protein MatE 
Protein accessionYP_001193414 
Protein GI146298823 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAGTT TTTTATTGGT CAGATTATAT ACAGGTATTT TGCCTACCGC CGAATATGGC 
GAAGTTTCGA TTGTATTGTC CTGGATGGTT TTCTTTAACG TAGTTCTTTC TTACGGAATG
GAAACGGCAT TTTTTAGATT TTACAGTGCC GAAGAAGACA AGAAAAATGT TATTGCAACA
TCTACAATAT CCATATTTTG GTCATCAATC GGGTTCTTGT TTGCAGCCTT AATTTTTAGA
AATACCCTCG CAAATTGGGC CGAAGTCGAT GCACAGTATA TTACCTATTC AGTTTGGATT
TTGGTTTTAG ATGCATTGGT TTTAGTACCG TTTTCTAAAC TAAGAGCCAA CCAGCGCCCA
ATGGTTTATG CAGCAATTAA AATTGGAAAC GTAGTCATTA ATTTATTACT GAATATTTTC
TTTTTAATGT ATCTGCCAAA ATTAGCAGCT GCAAATCCTA ATTCAGTTTG GGATAATTTA
TATGTAGAAA ATTTCCAGAT CGCTTATATT TTCATTGCAA ACCTTTTAGC GAGTTTAGCC
ACTTTCATTG TTCTTTCTCC AAATTATCTT TCGCTTGGAC GAAAATTTGA TCCTGTACTT
TGGAAAAAAA TGATGAAATA CGGACTGCCA ATTTTAGTAG CCGGACTTGC ATTTGCAGTT
AACGAACATT TCGATAAAAT CTTATTAGGA TATTTATTGC CCGAAAATTT GGCAAAATCT
GAAGTTGGAG CCTATTCTGC CTGTTATAAA CTAGGTTTAT TTATGGTTTT ATTTGCAACC
GCATTTAGAT TAGGAATTGA ACCTTTCTTT TTCAGCCATG CCAAAAACGA AAAAGCACCA
CAGACTTATG CCGTAATTAC AAAATACTTT GTAATTTTTG GATCATTGAT TTTATTGGGA
GTTATCGTTT TTGCCGATGT TTTAAAATTC CTTCTTCTGG ATAATAAATC ATATTGGGAA
GCAATGAAAG TAGTGCCATT AATTATTTTG GCAAACTTCT TTTTAGGAAT TTACAATAAC
CTTTCTGTTT GGTATAAACT AACAGATAAA ACAAAAATTG GAGCCTACAT TTCAATTGTT
GGTGCTATTA TAACATTAGT TTTAAATTAC TTTTTAATTC CAAAATACAG CTATTACGGT
TCTGCGATTG CAACAATTTC TGCTTACGGA AGTATGATGT TGATATCCTA TATTTTAGGA
AATAAGTATT ATCCAATACC TTATGATATG AATAAAATTG GAGCTTATTT AGGAATTTCA
ATTTTATTTT CGGCTATTTC CTTTTACGGA TTTAGAGAAA ATTATTTCGT TGGAATTCCG
TTATTATTAG CCTTTATGTA CTTTGTGTAC CACAACGAAA AAGACACGAT CAAAGGAATT
ATGAACAGAA AGTAA
 
Protein sequence
MLSFLLVRLY TGILPTAEYG EVSIVLSWMV FFNVVLSYGM ETAFFRFYSA EEDKKNVIAT 
STISIFWSSI GFLFAALIFR NTLANWAEVD AQYITYSVWI LVLDALVLVP FSKLRANQRP
MVYAAIKIGN VVINLLLNIF FLMYLPKLAA ANPNSVWDNL YVENFQIAYI FIANLLASLA
TFIVLSPNYL SLGRKFDPVL WKKMMKYGLP ILVAGLAFAV NEHFDKILLG YLLPENLAKS
EVGAYSACYK LGLFMVLFAT AFRLGIEPFF FSHAKNEKAP QTYAVITKYF VIFGSLILLG
VIVFADVLKF LLLDNKSYWE AMKVVPLIIL ANFFLGIYNN LSVWYKLTDK TKIGAYISIV
GAIITLVLNY FLIPKYSYYG SAIATISAYG SMMLISYILG NKYYPIPYDM NKIGAYLGIS
ILFSAISFYG FRENYFVGIP LLLAFMYFVY HNEKDTIKGI MNRK