| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1021 |
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| Symbol | |
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| ID | 5092749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 1164226 |
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| End bp | 1166349 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644740421 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001193373 |
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| Protein GI | 146298782 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.974178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAATA TTCAATTCAT TGCCAAGTCT GTTCAGGCAC CGGCAGTCAG TATTCAAAAC
ACAGTAAAAT TACTAGAGGA AGATTGTACG ATTCCGTTTA TTTCCCGATA CCGAAAAGAC
GCTACCGGAA ATCTTGATGA AACTGTAATT GAGCAGATTG CGAAACTTCA AAAAGATTAT
GATACGCTTA TAAAACGTAA AGAAGCCGTT TTAAAATCAA TTGAAGAGCA AAAAGCACTT
ACGCCAGAAT TGAAGAAAAA AATTGAAGAA AGTTTTGATT TACAAGAAAT TGAAGATTTT
TACCTTCCAT ATAAAAAGAA GAAAAAAACA AAAGCCGATG TGGCGCGCGA ATTTGGTCTT
GAACCTTTGG CAAAACTGAT TATATCTGAA AGTGACGCTG ATATCGATTT TATTTCGACA
CAATACATTA ATGAAAATGT TATTAACGAA GAAGCCGCTA TTCAAGGCGC AAGAGATATT
GTAGCAGAAT GGATTAACGA AAATATTTAC GTTCGTAAAC AATTAAGAAG ATTGTTTCAA
CGTAAAGCGA CAATCACAAC AAAAGTGGTT AAAAAGAAAG CAGAGGAAGA AGGCGCACAA
AAATTCAACC AATATTTTGA TTGGGAAGAG CCTTTAACAA AAGCGCCGGC ACACCGTTTA
TTAGCAATGT TACGTGCAGA AAATGAAGGT TTTATTAAAA TGAAAATCGA TGTTGATATC
GACGATGCCT ACGATGTTAT TGACGAAATT ATCATTAAAA AGCAAAATAA TTCAACAGCT
CATTTGCAAT TAGCAATTGA AGATAGTTAT AAACGTTTAT TGAATCCGGC AATTGGAAAT
GAAACCCTGC AGGAAGCAAA AGCAAAAGCC GATGCTAATT CTATTCAGGT TTTTGCTAAC
AATTTAGGAC AGTTATTATT AGCGCCACCG TTGGGAGAAA AACGTATTTT GGCAATTGAC
CCAGGATTTA GAAGCGGTTG TAAAGTGGTT TGTCTGGACG AAAAAGGCGA TTTATTATAC
AACGAAACGA TTTATCCACA TGCGCCGCAA AATGAGGAAT CGATGGCGAT CAAGAAAATT
CGTTCGATGG TAAATGCATA TCAAATTGAT GCCATTTCTA TTGGGAACGG AACGGCTTCT
CGCGAAACTG AATTTTTCAT CAAAAAAATC GCGTTCGACA AGCCAGTTCA GGTTTTTGTG
GTTTCTGAGG CAGGAGCTTC GGTATATTCA GCTTCAAAAA TTGCGAGAGA AGAATTTCCG
AATTATGATG TAACAGTTCG TGGATCAGTT TCTATTGGAA GAAGACTTTC AGATCCGTTG
GCCGAATTGG TAAAAATTGA CCCAAAAGCA ATTGGAGTAG GACAGTATCA GCACGATGTT
GATCAGACAA AACTAAAAGA AGAATTGGAC AGTACAGTAA TTCGCTGCGT GAACTCGGTT
GGAATTAACA TTAACACAGC AAGTAAACAT TTACTAAGCT ATGTGAGTGG AATTGGGGAG
AAGCTGGCCG AAAACATTGT ACAATACCGT TCTGAAAACG GACCTTTTGA AGACAGAAAA
CAGCTTAAGA AAGTACCGCG TTTAGGAGAT AAAGCTTATC AGCAGGGAGC AGCGTTTATT
AGAATTACAA ATGCTAAAAA TCCGCTGGAT AATTCGGCTG TACACCCAGA GGCTTATCCA
GTTGTTGAAA AGATGGCAAA AGATTTGAAT ATTTCTTTAA ACGACTTAAT TGCTAATAAA
GAGAAAACAG CCCTTATTAA GCCTGAAAAG TATGTAACAC CTGAAATTGG TTTACTTACG
CTGAAAGACA TCATAAAAGA GCTTGAAAAG CCTGGATTAG ACCCAAGAAA GTCTGCTAAG
GTTTTTGAAT TTGATGCAAA TGTAAAATCA ATCAAAGATT TGAAAACAGG AATGATTCTT
CCGGGAATTG TTAATAACAT CACCAACTTT GGCTGTTTTG TTGACATCGG AATCAAAGAA
AGCGGATTAG TGCATATTTC GCAGTTAAAA GCCGGCTTTG TAAGCGACGT AAACGAAGTG
GTTAAATTGC ATCAACATGT TGATGTTAAG GTTACTGAAG TTGACGAAGA TAGAAAGAGA
ATTCAATTGA CAATGATTTT ATAA
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| Protein sequence | MTNIQFIAKS VQAPAVSIQN TVKLLEEDCT IPFISRYRKD ATGNLDETVI EQIAKLQKDY
DTLIKRKEAV LKSIEEQKAL TPELKKKIEE SFDLQEIEDF YLPYKKKKKT KADVAREFGL
EPLAKLIISE SDADIDFIST QYINENVINE EAAIQGARDI VAEWINENIY VRKQLRRLFQ
RKATITTKVV KKKAEEEGAQ KFNQYFDWEE PLTKAPAHRL LAMLRAENEG FIKMKIDVDI
DDAYDVIDEI IIKKQNNSTA HLQLAIEDSY KRLLNPAIGN ETLQEAKAKA DANSIQVFAN
NLGQLLLAPP LGEKRILAID PGFRSGCKVV CLDEKGDLLY NETIYPHAPQ NEESMAIKKI
RSMVNAYQID AISIGNGTAS RETEFFIKKI AFDKPVQVFV VSEAGASVYS ASKIAREEFP
NYDVTVRGSV SIGRRLSDPL AELVKIDPKA IGVGQYQHDV DQTKLKEELD STVIRCVNSV
GININTASKH LLSYVSGIGE KLAENIVQYR SENGPFEDRK QLKKVPRLGD KAYQQGAAFI
RITNAKNPLD NSAVHPEAYP VVEKMAKDLN ISLNDLIANK EKTALIKPEK YVTPEIGLLT
LKDIIKELEK PGLDPRKSAK VFEFDANVKS IKDLKTGMIL PGIVNNITNF GCFVDIGIKE
SGLVHISQLK AGFVSDVNEV VKLHQHVDVK VTEVDEDRKR IQLTMIL
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