Gene Fjoh_1019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1019 
Symbol 
ID5090610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1163253 
End bp1163684 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content38% 
IMG OID644740419 
ProductRpiB/LacA/LacB family sugar-phosphate isomerase 
Protein accessionYP_001193371 
Protein GI146298780 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.485944 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTT CGATAGGAAA CGACCACGCA GGACCAGAAT ATAAAAAATC AATTGTAGCT 
ATGCTTGAAG CAAGAGGATA TGAAGTGACC AATTATGGAA CAGATACAGA TGCTTCTGTT
GATTATCCTG ATTTTGGACA TCCAGTTGCT AATGATGTAT CTGAAGGAAA AGCAGATTTT
GGAATCGTAA TCTGCGGAAG CGGTAACGGA ATTGCAATGA CGGTTAATAA ACACCCTAAA
GTAAGAGCTG GTTTATGCTG GACTAAAGAA ATTGCTTATT TAACGCGTTT ACATAACGAT
GCAAACATTG TAAGTATTCC AGCGAGATTT ACATCAATTC ATCAAGCTGT TGAAATCGTC
GAAACTTTCC TTGATACGGC TTTTGAAGGC GGAAGACATC AAAACCGAGT TAATAAGATT
GCTTGTTCGT AA
 
Protein sequence
MKISIGNDHA GPEYKKSIVA MLEARGYEVT NYGTDTDASV DYPDFGHPVA NDVSEGKADF 
GIVICGSGNG IAMTVNKHPK VRAGLCWTKE IAYLTRLHND ANIVSIPARF TSIHQAVEIV
ETFLDTAFEG GRHQNRVNKI ACS