| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0976 |
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| Symbol | |
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| ID | 5090567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 1091258 |
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| End bp | 1093090 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 644740375 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001193328 |
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| Protein GI | 146298737 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.773866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGTAA AGAAAATCTC CTTAGTGGTT GCCGCTTTGT TTTCAATGTC GATGTTTGCG
CAGGAAACTT CAGAACATGC AAAGGAAATA AAGCCAGAAG TAAAGTTGTC CTATTTAGAT
TCTATTAAAA GCACATTCAA AAAAGACGAT CTTGCTTCAA GAGTAGACAG TCTTTGGATG
AATGAGTTAG TAAGCTTAGA CATCTACGAT GATTTGACAA AAGATATTCA AACCATTAAT
AAGGATGTGA CAGTAGACGA AGAACTGCCA ACTGAACTTT TAAAACAGCG TTTGGCAGCA
ATGAATGCTA AATCTCCTTT TGAGATAGAA TACAATCAAG GATTAGAAAA TATAATAAAG
TCATTCCTTA AGAATCGTAA AAAATCGTTT TCTCGATTAA TGGCTTTATC AGAATACTAC
TTTCCAATAT TCGAGGAAAC TTTCGCTAAA GAAAAAATCC CATTGGAAAT AAAATATTTA
GCCGTTGTAG AATCTGCTTT AAACCCTAAA GCAGTTTCTA AAATGGGCGC CACGGGACTT
TGGCAGTTTA TGTACGGAAC CGGAAAACAA TACGCTTTAA AAATCGATTC TTATATCGAT
GAAAGAAGCG ACCCTCTTAA AGCTACTGCA GCATGCTCAG ATTACATGAC CAGAATGTTC
AGCGTTTTTA ACGACTGGGA ATTAGTTTTA GCATCTTACA ATTCAGGACC AGGAAACGTT
ACAAAAGCAA TCCGCCGTTC CGGAGGTAAA ACAGGATACT GGGATATTCG TAATTATCTT
CCAAAAGAAA CACAAGGATA CGTTCCGGCA TTTTATGCTA CTATGTACCT TTTTGAATAC
CACAAAGAGC ACGGAATCAA TCCGGAAAGA GCAGTGGTTA AAAACTTTGA AACAGACACT
GTTGGAATCA AAAATCAAAT CTCATTTAAG CAGTTAGCAG ATTTATTAGA TATGCCGCAA
TCGCAGCTGC AGCTTTTAAA TCCATCTTAC AAACTGAATA TAGTCCCGGC TTATCATGGA
GAAATGAATT TCCTTCGTCT GCCAAAAGAT AAAATTGCAG CTTTTGTTTC AAACGAAGAT
AAAATTTATG CTTATGTAGA ACATGAATCT CTGGTTAAAA CAATTCCAAC CCGTTTAGCA
GCTAAAATTG CTCCAAAAGG GAAATCAGTT AGAGAAGCTG TAGAATCTTC AAAAGACATT
CAGTTTTATA AAGTTAGAAA AGGAGACAAC TTAGGAACGA TTGCAGATAA GTACAATGTA
AATATTTCAG ATTTAAAAAA ATGGAATAAT CTTAAAACAA ATGCAATCGC ATTAGGAAGA
ACCCTAAAAA TTAAATCAGA TATAGATGCC TCGGCAAAAG TGGTTAAAGA ACCTAAATCT
ATACCTGCAA TCGAGAAAAA TACAGAAGAA GCAATTGCTT CTAACGATGA TAAAGATAAA
GTTTCAATTC AAACTGTAGA GTACGTTGTT GCTGCCGGAG ACAATTTAGG AAGCATTGCT
AAAAAATTCG GTACGACTAT TGCGGACTTA AAAGAATTAA ATGATCTTAC GTCTAATAAT
ATTGGTTTAG GAAAAACATT AGTAGTTTCT AAAATTGTTA CAGAGATTCA AGAGCCTGTT
ACAACAGCGA TTGCTTCAAA CTCTGTAGAC GCTTTCAAGA AAAAAGCTCC ATCGGCTAAA
AGTGCAAGCG AAGATTATTA CGTAAAAAAA GGTGATTCTT TGTACAGTAT TTCTAAAAAA
TATCCTGGAG TAACAATTTC AGATATTAAA AAATGGAATG GTATTAAAGA TGAAGATATT
AAACCGGGAA TGAAACTTAA AATAAACGGA TAA
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| Protein sequence | MIVKKISLVV AALFSMSMFA QETSEHAKEI KPEVKLSYLD SIKSTFKKDD LASRVDSLWM
NELVSLDIYD DLTKDIQTIN KDVTVDEELP TELLKQRLAA MNAKSPFEIE YNQGLENIIK
SFLKNRKKSF SRLMALSEYY FPIFEETFAK EKIPLEIKYL AVVESALNPK AVSKMGATGL
WQFMYGTGKQ YALKIDSYID ERSDPLKATA ACSDYMTRMF SVFNDWELVL ASYNSGPGNV
TKAIRRSGGK TGYWDIRNYL PKETQGYVPA FYATMYLFEY HKEHGINPER AVVKNFETDT
VGIKNQISFK QLADLLDMPQ SQLQLLNPSY KLNIVPAYHG EMNFLRLPKD KIAAFVSNED
KIYAYVEHES LVKTIPTRLA AKIAPKGKSV REAVESSKDI QFYKVRKGDN LGTIADKYNV
NISDLKKWNN LKTNAIALGR TLKIKSDIDA SAKVVKEPKS IPAIEKNTEE AIASNDDKDK
VSIQTVEYVV AAGDNLGSIA KKFGTTIADL KELNDLTSNN IGLGKTLVVS KIVTEIQEPV
TTAIASNSVD AFKKKAPSAK SASEDYYVKK GDSLYSISKK YPGVTISDIK KWNGIKDEDI
KPGMKLKING
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