Gene Fjoh_0945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0945 
Symbol 
ID5091359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand+ 
Start bp1057685 
End bp1058350 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content34% 
IMG OID644740345 
Producturoporphyrinogen III synthase HEM4 
Protein accessionYP_001193298 
Protein GI146298707 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.349608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAACC CAATTCAGAT ATTATCTACT AAAATACTAT CGCCTCTTCA TAAACAAGAG 
TTGGTTAAAA TTGGCATCGA AGTAATCGAA GCTGATTTCA TTAAAACAGA AAACAAACCT 
TTCGAATTAA AAGACCTTAA CGAAAGTCTG ATTTTCACAA GTCAAAATGC CGTTCACAGT 
GTTTTATCAA ATCCAAAATC CGAAGAACTT AAAAGCAAAA ATGTGTATTG CGTTGGACTT 
AAAACCAAAA CGCTTTTAAG CGATAATGGC TTTAATGTTG TGGCTTATAC AGGTTACGCA 
TCTGATTTGG CAGAAATTAT CACTTTGATT TATGGAAATG AAAGTTATAC TTTTTTCAGC 
GGCAACTTAA GAAGAGATAC TTTGCCAGAA GCTTTGAAAG AAGCCGGGAT AAAACTCAAT 
GAAATTCAGG TTTATGAAAC TACACTGCAG CCACAAAAAA TAAAAGCAAA TCCAGAAGCA 
CTTTTGTTTT TTAGTCCATC TGGAGTAAAA AGTTATCTGA AAGACAACAC CATAAATAAA 
CAGCTTTGTT TCTGTATTGG AGAAACCACC GCAGAAGCTT TACATAAAAT CACCAAAAAC 
ATCATTATCG CAGATCAGCC CACAATTGAA GACGTGATCG AAGATGTAAT TCAAGAATAT 
AAATAG
 
Protein sequence
MANPIQILST KILSPLHKQE LVKIGIEVIE ADFIKTENKP FELKDLNESL IFTSQNAVHS 
VLSNPKSEEL KSKNVYCVGL KTKTLLSDNG FNVVAYTGYA SDLAEIITLI YGNESYTFFS 
GNLRRDTLPE ALKEAGIKLN EIQVYETTLQ PQKIKANPEA LLFFSPSGVK SYLKDNTINK 
QLCFCIGETT AEALHKITKN IIIADQPTIE DVIEDVIQEY K