Gene Fjoh_0908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0908 
Symbol 
ID5091764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1025531 
End bp1026898 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content38% 
IMG OID644740308 
ProductRND efflux system outer membrane lipoprotein 
Protein accessionYP_001193261 
Protein GI146298670 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTC TAAAAATACT TCTAGCAATA TTTTTGATAG CTGTTTTCCC TTACGGATGT 
ATGGTTGGAC CAAAGTATGC CAAACCAGAA CAGCCTCAAA CAGATTCTTT CCGTTACAGC
AATCAGTCTG CTGATAGCAC AAAATCGGTT ACGACTATAA AATGGTCATC GATATTTAAC
GATGATGTCT TAATTGGTTT GATTGAAAAA GGAATCCAGA ACAATTATGA TCTTAAAATT
GCCATTGCTC GACTAGAGCA AGTACAAGCC AATCTTGGAA TGGCAAAAGC CGATTTATTT
CCTGCTTTTC AATATTCCGG TCAGGTCAAT AGTGCCGAAA CTTTCATGCA GCCTTCATCA
GTATTTGCCA ATATGTCTTG GGAACTTGAT TTTTGGGGAA AATACCGTCA TCAGACTAAA
GCTTTACAAA ATGAACTTTT AGCTTCTGAT GAAGCCCGAA AAGTAGTATT GTCTAATATT
GTAAGTACAA TTGCGACTTC TTATTTTGAA CTGCGAGACT TTGATAATCA ATTGGAAATT
ACCATTCACA CTTTAGAAAC CAGACAAAAA GCGTATGATA TTATCAACGA ACGTTTTATA
AGCGGTTATG TTGCGGAATT GGATAAAGTA CAAATCGAAC AGCAGGTTGC CATTGCCGAA
GCAAATATTC CGCTAATTAA AAGACAGATT ACGGCTTTAG AAAATTCAAT TTCAATTCTG
GTTGGACAAG TTCCACAGCC TATTCCAAGA GGAAAAACCA ACAGTGAATT ATTGATTTTA
ACAGAGTTCC CAACTTCTGT ACCATCTGCA TTACTGGAAA ACAGGCCCGA TGTAAAACGT
CAGGAGTATT TGTATAAAGC CGCTTTTGAA AGAATTGGCG TTGCACAAGC GTTGCGATAT
CCGTCATTTA ACATTGGAGC GCTTGCCGGT TTTGCGAGTA TTACGGTTGG AGATTTATTT
AACGACGGTT CTTACACACA AAATGTCGGC GCTGGAGTTG CAGGTCCGAT CTTCAACTTC
GGAAAAAACA AAAGACGTGT TGAAGTCAAT CGACAAATTG CAGAAGAAAT GAAATTCAAT
TTCCAGAAAA CCTATTTAAC CGCAATTTCT GAAGTCGAGA ACTCGCTCCA AAACGTGGCG
ATGTTTAAAG AAGAATGGAC TGCCAGAAAC AGGCAAGTCG TTGCGGCTCA AAAAAACTAC
GATCTTTCAA ACGCCAGATA TTACAATGGT TATGTTTCGT ACTTAGAAGT TTTGGACGCA
CAAAGATCTT TGTTTGAAGC GCAGTTGAGC CTTTCGCAAT TAACTCAAAA ACAATTAAGT
TCGATGGTTC AGTTATATAA AGCGCTGGGA GGAGGATGGA GCTTTTAA
 
Protein sequence
MKTLKILLAI FLIAVFPYGC MVGPKYAKPE QPQTDSFRYS NQSADSTKSV TTIKWSSIFN 
DDVLIGLIEK GIQNNYDLKI AIARLEQVQA NLGMAKADLF PAFQYSGQVN SAETFMQPSS
VFANMSWELD FWGKYRHQTK ALQNELLASD EARKVVLSNI VSTIATSYFE LRDFDNQLEI
TIHTLETRQK AYDIINERFI SGYVAELDKV QIEQQVAIAE ANIPLIKRQI TALENSISIL
VGQVPQPIPR GKTNSELLIL TEFPTSVPSA LLENRPDVKR QEYLYKAAFE RIGVAQALRY
PSFNIGALAG FASITVGDLF NDGSYTQNVG AGVAGPIFNF GKNKRRVEVN RQIAEEMKFN
FQKTYLTAIS EVENSLQNVA MFKEEWTARN RQVVAAQKNY DLSNARYYNG YVSYLEVLDA
QRSLFEAQLS LSQLTQKQLS SMVQLYKALG GGWSF