Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0908 |
Symbol | |
ID | 5091764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 1025531 |
End bp | 1026898 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644740308 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_001193261 |
Protein GI | 146298670 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAACTC TAAAAATACT TCTAGCAATA TTTTTGATAG CTGTTTTCCC TTACGGATGT ATGGTTGGAC CAAAGTATGC CAAACCAGAA CAGCCTCAAA CAGATTCTTT CCGTTACAGC AATCAGTCTG CTGATAGCAC AAAATCGGTT ACGACTATAA AATGGTCATC GATATTTAAC GATGATGTCT TAATTGGTTT GATTGAAAAA GGAATCCAGA ACAATTATGA TCTTAAAATT GCCATTGCTC GACTAGAGCA AGTACAAGCC AATCTTGGAA TGGCAAAAGC CGATTTATTT CCTGCTTTTC AATATTCCGG TCAGGTCAAT AGTGCCGAAA CTTTCATGCA GCCTTCATCA GTATTTGCCA ATATGTCTTG GGAACTTGAT TTTTGGGGAA AATACCGTCA TCAGACTAAA GCTTTACAAA ATGAACTTTT AGCTTCTGAT GAAGCCCGAA AAGTAGTATT GTCTAATATT GTAAGTACAA TTGCGACTTC TTATTTTGAA CTGCGAGACT TTGATAATCA ATTGGAAATT ACCATTCACA CTTTAGAAAC CAGACAAAAA GCGTATGATA TTATCAACGA ACGTTTTATA AGCGGTTATG TTGCGGAATT GGATAAAGTA CAAATCGAAC AGCAGGTTGC CATTGCCGAA GCAAATATTC CGCTAATTAA AAGACAGATT ACGGCTTTAG AAAATTCAAT TTCAATTCTG GTTGGACAAG TTCCACAGCC TATTCCAAGA GGAAAAACCA ACAGTGAATT ATTGATTTTA ACAGAGTTCC CAACTTCTGT ACCATCTGCA TTACTGGAAA ACAGGCCCGA TGTAAAACGT CAGGAGTATT TGTATAAAGC CGCTTTTGAA AGAATTGGCG TTGCACAAGC GTTGCGATAT CCGTCATTTA ACATTGGAGC GCTTGCCGGT TTTGCGAGTA TTACGGTTGG AGATTTATTT AACGACGGTT CTTACACACA AAATGTCGGC GCTGGAGTTG CAGGTCCGAT CTTCAACTTC GGAAAAAACA AAAGACGTGT TGAAGTCAAT CGACAAATTG CAGAAGAAAT GAAATTCAAT TTCCAGAAAA CCTATTTAAC CGCAATTTCT GAAGTCGAGA ACTCGCTCCA AAACGTGGCG ATGTTTAAAG AAGAATGGAC TGCCAGAAAC AGGCAAGTCG TTGCGGCTCA AAAAAACTAC GATCTTTCAA ACGCCAGATA TTACAATGGT TATGTTTCGT ACTTAGAAGT TTTGGACGCA CAAAGATCTT TGTTTGAAGC GCAGTTGAGC CTTTCGCAAT TAACTCAAAA ACAATTAAGT TCGATGGTTC AGTTATATAA AGCGCTGGGA GGAGGATGGA GCTTTTAA
|
Protein sequence | MKTLKILLAI FLIAVFPYGC MVGPKYAKPE QPQTDSFRYS NQSADSTKSV TTIKWSSIFN DDVLIGLIEK GIQNNYDLKI AIARLEQVQA NLGMAKADLF PAFQYSGQVN SAETFMQPSS VFANMSWELD FWGKYRHQTK ALQNELLASD EARKVVLSNI VSTIATSYFE LRDFDNQLEI TIHTLETRQK AYDIINERFI SGYVAELDKV QIEQQVAIAE ANIPLIKRQI TALENSISIL VGQVPQPIPR GKTNSELLIL TEFPTSVPSA LLENRPDVKR QEYLYKAAFE RIGVAQALRY PSFNIGALAG FASITVGDLF NDGSYTQNVG AGVAGPIFNF GKNKRRVEVN RQIAEEMKFN FQKTYLTAIS EVENSLQNVA MFKEEWTARN RQVVAAQKNY DLSNARYYNG YVSYLEVLDA QRSLFEAQLS LSQLTQKQLS SMVQLYKALG GGWSF
|
| |