| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0888 |
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| Symbol | |
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| ID | 5091744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 1002892 |
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| End bp | 1003593 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644740288 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_001193241 |
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| Protein GI | 146298650 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAACAA AAAAAGTTAA TAATGTTCAG GAAGCTATTG CAGGAATCGA AACCGGAATG
ACAATTATGT TTGGCGGATT TGGTTTGTGC GGTATTCCAG AAAATACAAT CGCTGCATTA
GTAAATACTC AAATTTCAGA TTTAACCTGT ATTTCAAATA ATGCAGGTGT AGATGATTTT
GGTTTAGGTT TGCTTTTGCA GAAAAAACAA ATCAAAAAAA TGATTTCTTC GTATGTTGGA
GAAAATGCCG AGTTCGAACG TCAGATGCTT TCTGGAGAAC TGGAAGTTGA ATTAACACCG
CAGGGAACTT TGGCTGAACG CTGTCGTGCA GCTCAGGCAG GAATTCCGGC ATTTTTTACG
CCGGCTGGTT ACGGAACCGA AGTTGCCGAA GGCAAAGAAG TACGTGAATT TAACGGCAAA
ATGCATATTA TGGAAGAAGC TTTTAAAGCA GATTTTGCAA TTGTAAAAGC ATGGAAAGGC
GACGAAGCCG GAAATCTTAT TTTTAAAGGA ACTGCAAGAA ACTTTAATGC CTGCATGGCG
GGAGCTGGAA AAATCACGAT TGCCGAAGTT GAAGAATTGG TTCCTGTTGG AACTCTGGAT
CCAAATCAAA TTCACATTCC CGGAATTATG GTACAGCGTA TCTTTCAGGG AGAAAAATTT
GAAAAAAGAA TTGAACAGCG AACTGTAAGA ACTAGAAATT AG
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| Protein sequence | MITKKVNNVQ EAIAGIETGM TIMFGGFGLC GIPENTIAAL VNTQISDLTC ISNNAGVDDF
GLGLLLQKKQ IKKMISSYVG ENAEFERQML SGELEVELTP QGTLAERCRA AQAGIPAFFT
PAGYGTEVAE GKEVREFNGK MHIMEEAFKA DFAIVKAWKG DEAGNLIFKG TARNFNACMA
GAGKITIAEV EELVPVGTLD PNQIHIPGIM VQRIFQGEKF EKRIEQRTVR TRN
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