| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0848 |
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| Symbol | |
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| ID | 5092037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 960261 |
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| End bp | 961670 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 644740248 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001193201 |
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| Protein GI | 146298610 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAA AGATCCTTTT TGCCTTATTC ATCTGTCCTG TTTTTCTGCT GGCTCAGGAA
AAAGAAAAAG AGGTATCTGA TAATGTTACC CGATATTTTT ATTACGATAA AGTAGTTTCG
GTTGCGATTT GGTATGGAGC AGATAAAAAA CCGGATAGCT CGAAAACTTA TTATTCGAAC
GGGAAACTAA ATGAAGTTTT CTATTTTGAT AAAGACGGAT TAAAAGACGG CGATTGTTTT
CAGTATAATA AACAGGGGGA AAAATTGGTA ACGTGGAATT TTGCACACGG AAAAATGACC
GGCAGGACAG ATCATAAACT TCCGTTTAAT AAAGATCGAG AAGAAACGGT AACCAAAGCC
TTAAAAATGC TCACGGATAT TAATACAAGA ACCAATTTTA ATCCAACAAA AATAAATGAT
CTTTACAATC GTGGTGTTTT AAGCATTAGT CTTGGCAATA ATACTTTGGC GATTGAGGAT
TTAAAAAAGG TTGAATATGC GATTGATAAA GATCCGAAAA ATAAAAAATT AGTATTTTCA
GATTCGGCTC AAAAAAAGGC AGCTATTTTT CGCAGTAAGC TTTATGACCG AATGGCAAGT
ATTTACGCAG CGCTTGAAAT GGAAGGGTTT GCTCTAAATT ATTATCATAA AGCAATTAAG
AACGCGCCCA ATGATTATCG CATTTTATAT AATTTCGCAA CATTGTTGCA AAATAGGAAA
ATGAATGATT TGGCGCGTTA TTATTTAGAG AAAATTGTAA TCGAAAAACC AGACCATGCC
CACGCATACT GGGGACTTGC CAGATTATTG AGTGATGAAG GCGAGTATGA AAAAGCATTC
GAAAATATCC AGAAAGCGTT TCAATACGAA AAGCAGATTA TTGAAAGAAC AGCTGCTTAC
GGAGGAAGAG ATTTAAAAAC AACCAGAGGA TTAATTTATC ATAAACTGGG AGAATCCAAA
AAGGGAATTG CCGATTTGAA AGCTGCATTA GAAATGGATA AAAACAATTC GTATGCAATG
AAAAATCTCG GCATAATTTA TCTGGATCAG AAAAAGTATG ACGATGCCTG CGAATTATTT
CAAAAAGCAA AAGACCTCAA TTATACTTTA GCTTACGACG AATTTGATTT GGACGCACTT
TTAGAAGATG CGTGTAATAA ACGCCAGCCG GAAAAAGAAG TTAAAATCAA ACCGTATGTT
TTTCCAAATC CGGCTCAAAC CACAATTACA GTTGAGAATC TTAATTCAAA AAACTTTGAT
TTTGAGTTTT TTAATTTTGA ATCAAAATCG GTTTTAAAAG GAAAAACCAG CGACGGAACA
ATAAACATCC TCGGACTTGA TTCCGGGTTT TATATTTTAA AAACTACTAT TGGAGAAACT
GTAGAAACTT TTAAAGTCAT AAAAGAATAG
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| Protein sequence | MFKKILFALF ICPVFLLAQE KEKEVSDNVT RYFYYDKVVS VAIWYGADKK PDSSKTYYSN
GKLNEVFYFD KDGLKDGDCF QYNKQGEKLV TWNFAHGKMT GRTDHKLPFN KDREETVTKA
LKMLTDINTR TNFNPTKIND LYNRGVLSIS LGNNTLAIED LKKVEYAIDK DPKNKKLVFS
DSAQKKAAIF RSKLYDRMAS IYAALEMEGF ALNYYHKAIK NAPNDYRILY NFATLLQNRK
MNDLARYYLE KIVIEKPDHA HAYWGLARLL SDEGEYEKAF ENIQKAFQYE KQIIERTAAY
GGRDLKTTRG LIYHKLGESK KGIADLKAAL EMDKNNSYAM KNLGIIYLDQ KKYDDACELF
QKAKDLNYTL AYDEFDLDAL LEDACNKRQP EKEVKIKPYV FPNPAQTTIT VENLNSKNFD
FEFFNFESKS VLKGKTSDGT INILGLDSGF YILKTTIGET VETFKVIKE
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