Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0805 |
Symbol | |
ID | 5091994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 904059 |
End bp | 907124 |
Gene Length | 3066 bp |
Protein Length | 1021 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644740205 |
Product | hypothetical protein |
Protein accession | YP_001193158 |
Protein GI | 146298567 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01451] conserved repeat domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.265346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGCCCAA AATCACTTTT GTTTATTCGT TCTTTATTTT TAAAAAGTAT AATTTTATTT TTCTTGTTTA TTTCATTTGA AGTATCAGGC CAGTCTGCTG TTACAAGAAT TATAACAGAT TGGAAGGGTT ATTGGTCATC AACTGGTTTA ACCGGAGTAG GAAATCGACC TGACGATGTC AATAATTTAT TGGCTTTTAC ATGGAATGGA ACTATTTATT CTACAGGTGT AAATAACACT ATTCTTAACA ACAATGCCGT TACTTACAAT CCTCAAAGAT TTAGAGCTTT AAAGATTCAA AATTTAGGTT CCACCACGAG TATGTATTTT TTACAAGGTT CTATGATAGA TGGATCTGCC TCAACAGCTA CCTTAGTGCC GCCAATAGCA GGAGCAACTG CAACAGGTGC TGAACTAGCT TCAAGATTAA CAGATGGTGT TAACGGATTA ACACTAGGAA CTGGTGTTGC AAATATAAAA GCGGGTGTCG CTGAATTTAA AATAGGAACT AATAATTTAA ATTCAAGCGG TATTGGCGAT GGAATTCCTG ATTTAATTGT GACTCAGGTA GCAGAACCTG GAGGAACACC AGATACTTTC AAATTCATTG ATGCATCAGG CAACACTGTA GGAAATCAAT TGTCTATAAA CTTTATTTCG GTTAATGCTG TTGGAACTTA TAGTCTTGAT TTATTTAAGA TGGATGGGAC ATATGGTTTT ACTCCGGCAG CAACAAGAGA CATTCGTGTT TTGGGAATCG AAACAAGTGA ATTTGGAATA ACAGCTGCTA ATGCATCACA AGTTGATCGA TTTGTTGTTA CCTTTTCAGG AAATTCAGAT TGCGCTTTTA TAGCTTTTAA TACAAATTCT CTAAAAATTG CTGAATTAGG TTTAGTAAAA AAAGCTTCAA TGCCATCATG TGGAAAAGAA GGAGATGTTA TTAATTATAC TTTTGATGTA AGAAATACAG GAGAAGTGCC AATTACAGAT ATAACAGTAA CTGATCCGAT GCCGGGAGTA ATAATAACTG GAAATCCCAT CAGTAGTTTA GCAGTGGGGG CTACAGCAAC GGTTACTGGT ACTTATACCA TAACGGCATC TGATGTAAAT TTGGGAAGAG TTGTAAATTC AGCAAAGGTT ACTGGAACAG ATCCTTCGTT AAATCTAATA GAAGATATTT CAGGACAAAC CTTTACGGAT AATATTCCAA CAAGCATAGA CTTACTTGCT CCGCCAGTTA TTGGTACAAT AACTAATACA GGGTGTGCCG CTTTGGGAAC AATAGAATTA ACAAATCTGC CTTCAGGTAA TTGGACTATA GAACGTAGTC CTGGACTTAT TACTACAACC GGCTCAGGAA TAACTACAAC AATTACAGGT CTTACGGCAG GGACATACAC TTTTAGAGTA ACCAATTCAA CAGGATGTAA ATCACCAGCA AGTGCAAATG CAGTTGTTAC AGATCAATCC TCTACAACTT GGAACGGTAC TGCTTGGTCA AACGGAACGC CAAATGCCAC AAAAGCTGCG GTCTTTAATG GAGCTTATTC TATAACAGCA GATTTAACAG TATGTGCCTG CACAGTTAAT TCTCCTGTTA ATTTAGTTGT CCCATCTGGA ATAACATTAC ATGTTGTAAA TGCTTTAACA GTAAATAGTG GTGCTTCTTT AACTTTCAAT AATAATTCTA GTTTGTTTCA AACTAATACC GGAACAAATA TCAATTCAGG AAACATCACT TACAGAAGAG ATACACAGCC GGTACGTCGT TACGATTTCA CCTATTGGTC AACACCAGTA ACTTCGACTC CTGCTTTTAC ACTGGCAAAC CTTTCGCCGG CAACACTTCT AGATAAATAT TACAGCTATG ATCCTGCTGC AGGATGGATA ATAAGTTTTA ATGGAATACT GCCAATGGCC AAAGGAAGCG GTTACATCGT TAGATCTCCG CAGACTTTTG ATATTGTAAC ACCGGCAGTT TATCCTGCTT CCTTTGTTGG AGTTCCAAAT AACGGAAATG TTACAGTTAA TGTAGTTCCA AACAGTTTTA ATTTAATAGG GAATCCCTAT CCTTCTGCCG TAAATGCTTT TCAGCTTTTA TCAGCAAACA GCACTATAGG ATCATTATAT TTCTGGATGC ATAATGCCCC TCCAAGCGAT GCTGTTTCAG GAGATGCTAC ATACAATTAC ACAAGCAGTG ACTATGCGGT TTTTAATTCA TCAGGAGGTG TCACAACTTC AAATGCTGCT CAGACTCCGG TTGGATATAT TGCAGCGGGA CAGGCTTTCT TTACCAACAA TGGAACAGGA AACAGCATTT TGTTTACAAA TAACATGAGA GTTTCAGGCA ATAACAGCCA GTTTTATAAA ACAACAGGAA CAGATAATAT CGAAAGAAAC CGTATCTGGC TGAATTTTGC CAATAAAGAA GGAGCTTTCA AACAGCTCTT AGTAGGATAT ATTGATGGCG CAACAAACAA TTGGGACATT CAATACGATG CAGAAACTAT GGATGCAAAT ACCTATACAG ATTTTTACAG TATTAACCAA AATATGTCTT TAACCATTCA GGGACGAGGA CTGCCTTTTG AGAACAGCGA TGTGATTCCG TTAGGGTACA AAACAACAAT TGCGGGAGAT TTTACGATTT CAATTGATCA CGTTGACGGA TTATTTGATA ACCAGAATGT ATATCTGGAA GACAAAACAA CAGGAACTGT TTCAGATTTA AAAGCTCAGG ACTATACTTT TAAAACAGAA GCAGGAACTT TTACAGATCG TTTTGCACTT CGTTACACTA ATAAAACATT AGGAACTGGT GATTTTGAAA ATGTAAAAGA CGGACTTTTA ATTTCTGTAA AAGATAAAAC TATCAAAGTT ACTTCTGCAA AAGAGAACAT TAAAGAAGTA AACATTTTCG ATATTACAGG AAAACTGATT TATAATAAAA AGAAAGTCAG CAATACTGAA TTATCAATCT CAAACCTTCA GTCAGCCGAT CAGGTGCTGC TTGTAAAAGT TAATCTTGAA AACAATGCAG AGGTAACCAG AAAAATCGTT TTTTAA
|
Protein sequence | MCPKSLLFIR SLFLKSIILF FLFISFEVSG QSAVTRIITD WKGYWSSTGL TGVGNRPDDV NNLLAFTWNG TIYSTGVNNT ILNNNAVTYN PQRFRALKIQ NLGSTTSMYF LQGSMIDGSA STATLVPPIA GATATGAELA SRLTDGVNGL TLGTGVANIK AGVAEFKIGT NNLNSSGIGD GIPDLIVTQV AEPGGTPDTF KFIDASGNTV GNQLSINFIS VNAVGTYSLD LFKMDGTYGF TPAATRDIRV LGIETSEFGI TAANASQVDR FVVTFSGNSD CAFIAFNTNS LKIAELGLVK KASMPSCGKE GDVINYTFDV RNTGEVPITD ITVTDPMPGV IITGNPISSL AVGATATVTG TYTITASDVN LGRVVNSAKV TGTDPSLNLI EDISGQTFTD NIPTSIDLLA PPVIGTITNT GCAALGTIEL TNLPSGNWTI ERSPGLITTT GSGITTTITG LTAGTYTFRV TNSTGCKSPA SANAVVTDQS STTWNGTAWS NGTPNATKAA VFNGAYSITA DLTVCACTVN SPVNLVVPSG ITLHVVNALT VNSGASLTFN NNSSLFQTNT GTNINSGNIT YRRDTQPVRR YDFTYWSTPV TSTPAFTLAN LSPATLLDKY YSYDPAAGWI ISFNGILPMA KGSGYIVRSP QTFDIVTPAV YPASFVGVPN NGNVTVNVVP NSFNLIGNPY PSAVNAFQLL SANSTIGSLY FWMHNAPPSD AVSGDATYNY TSSDYAVFNS SGGVTTSNAA QTPVGYIAAG QAFFTNNGTG NSILFTNNMR VSGNNSQFYK TTGTDNIERN RIWLNFANKE GAFKQLLVGY IDGATNNWDI QYDAETMDAN TYTDFYSINQ NMSLTIQGRG LPFENSDVIP LGYKTTIAGD FTISIDHVDG LFDNQNVYLE DKTTGTVSDL KAQDYTFKTE AGTFTDRFAL RYTNKTLGTG DFENVKDGLL ISVKDKTIKV TSAKENIKEV NIFDITGKLI YNKKKVSNTE LSISNLQSAD QVLLVKVNLE NNAEVTRKIV F
|
| |