Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0779 |
Symbol | |
ID | 5093717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 865012 |
End bp | 867495 |
Gene Length | 2484 bp |
Protein Length | 827 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644740179 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001193132 |
Protein GI | 146298541 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCAGC TAACTTCATA TAAAAAACTA GGATTACTAT TTGCAGGCTT TCTTTTATTG ACAGCATGCA AGTCATCAAC AGATCAAAAA TTTAGTAACC GAAAAGTTTC TTTTAATGCA GATTGGAGTT TCCACCTTAA CGACAGTATT GCAGATAAAG ATACTATTGG AGCGGGAACA AAATGGAGAA CTTTAGACGT TCCGCATGAT TGGAGTATCG AAGGAAAATT TGATGAAAAA AGTCCTGGCG GTTATGGCGG AGGATCGCTT AACGGAGGTT TGGGCTGGTA CAAAAAAACA TTTAAAGTAG CTGCAGAAGA CAGCACAAAA GTAACTTCAA TCACTTTTGA CGGTGTTTAC AAAAACAGTG AAGTCTGGGT AAACGGACAT TATTTAGGAA AACGTCCAAA CGGATATATT GGTTTTCAAT ATGAAATTAC GCCGTACTTA AATTACGGAG ACAAAAACAA CGAAATAATT GTTAAGGTTG ACAATTCAAA ACAACCTAAT TCACGCTGGT ATTCGGGTTC AGGAATTTTT AGAAATGTTT GGCTTGAGAC CACAGATAAA CTTCATGTAG GACAATGGGG AACGTATATT ACAACTCCAA AAGTTACAGC CGAAAAAGCT TCAGTAAGTA TTGAAACCAC AATAAAAAAT CAATACAAAG AAGGTAAAAA AGCAACGGTA ACTACCACCA TTTTTAAAGA AGATAAAAAA GTAACATCAG TTACTCAAGA TATAACAATC AACGCCAGCG AAAATCAAAC GCTGAATCAA TCGGCGGAAG TTGAAAATCC GATTTTATGG TCAGATGAAA ACCCTGAATT GTACACAGCA GTTACCGAAA TTTCACTTGA CGATAAAATC ATTGATCAAT ATAAAACCAC TTTCGGAATT AGAGATTTTA AATTCGATTT GAACAAAGGT TTTATTTTGA ATGGAAAACA AGTCAAAATA AAAGGTGTTT GTATGCACCA CGATTTAGGA CCATTAGGTT CTGCGATCAA CACGCGTGCA ATCGAACGTC AGTTAGAAAT TTTGAAAGAA ATGGGCGTAA ACGGAATCAG AACTTCTCAT AATCCGCCTG CTCCAGAGCT TTTAGAACTC TGCGATAAAA TGGGTTTCAT TGTTATGGAT GAAGCTTTTG ATATGTGGAA ACAGACCAAA ACCAAATACG ATTACGGAAA CGATTGGGAC AAATGGCACA AACAAGATTT AATCGATCAA CTGCTTCGCG ACCGAAATCA TGCCAGTATT TTTATGTGGA GTATTGGAAA TGAAATTCCG GAACAATGGA GTGAAAAAGG TGTTGAAATT GCGAAAGAAT TGGCCGCAAT TACACGTCAA TATGACAAAA CACGACCGTT GACTGCAGGA ATGAATCCGC CAGTAAACAT GAATATTGAT GCCGTGACTT TACAATTTGA GAAAAAGGAT GTTTCGATTA ATCCGCTTGC TGGATCTGGA GTTTTAGATT TAATTGGATA CAATTATGCG CATCAAACTT TTGAACATCA TTTGGAAAAC TTTCCAAAAA CACCTTTTAT CGCAACTGAA ACTACTTCAG GTTTACAGAC AAGAGGATAT TACGATGCCG TTTCAGATAC TATCAAAAAA TGGCCGGTAA GATGGGATCT TAAATTTACA GAAGGAAATC CTGGAAATAC CGTTTCGGCT TACGACCAAG TGCAAACGCC TTGGGGATCT ACACACGAAG CGACTTGGAA AATCATTAAA AAACACGATT TCTTGGCAGG AATGTATGTT TGGACAGGCT TCGATTATAT CGGAGAACCA ACTCCTTATG AATGGCCGTC TGTTAGTTCC TATTTCGGAA TTGTCGATTT AGCAGGTTTT CCGAAAGACG TGTATTATAT GTACCAAAGC GAATGGACAG ATAAAACCGT TTTGCACATT TTCCCACATT GGAACTGGAA AGCCGGACAA ACTGTTGATG TTTGGGCATA CTACAATAAA GCCGATGAGG TGGAACTTTT TGTAAACGGA AAATCAGTTG GAAAAAGAAG TAAAAAAGGA GACGATTTAC ATGTGATGTG GAGAATTCCT TTTGAAGCTG GAACTCTAAA AGCAGTTTCT CGTAAAGACG GAAAAGTGGT TTTAGAAAAA GAAATCAAAA CAGCTGGAAA TCCTTCTCAA TTAAAATTAA CTGCGGATAG AAGCACTATA AAAGCAGACA AAAACGATTT GTCATTTATC ACAGTTGATA TTTTAGATGA TAAAGGAACG ATTGCACCAA ATGCGAATAA CGAAATTAAT TTCTCTTTAA AAGGAAATGG AAAAATTGTA GGCGTTTGCA GCGGAGACCC AGTAAGTCAC GAGTCTTACA AAGGAAATAA ACATACCGCT TTGGCTGGAA AATGTTTGGT TATTGTACAA TCTGGAGATA AATCAGGAAG ATTGGAATTA ACCGCAAAAG CAAACGGATT GAAACAATCA ACAATTGTAA TTACTACTGA ATGA
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Protein sequence | MLQLTSYKKL GLLFAGFLLL TACKSSTDQK FSNRKVSFNA DWSFHLNDSI ADKDTIGAGT KWRTLDVPHD WSIEGKFDEK SPGGYGGGSL NGGLGWYKKT FKVAAEDSTK VTSITFDGVY KNSEVWVNGH YLGKRPNGYI GFQYEITPYL NYGDKNNEII VKVDNSKQPN SRWYSGSGIF RNVWLETTDK LHVGQWGTYI TTPKVTAEKA SVSIETTIKN QYKEGKKATV TTTIFKEDKK VTSVTQDITI NASENQTLNQ SAEVENPILW SDENPELYTA VTEISLDDKI IDQYKTTFGI RDFKFDLNKG FILNGKQVKI KGVCMHHDLG PLGSAINTRA IERQLEILKE MGVNGIRTSH NPPAPELLEL CDKMGFIVMD EAFDMWKQTK TKYDYGNDWD KWHKQDLIDQ LLRDRNHASI FMWSIGNEIP EQWSEKGVEI AKELAAITRQ YDKTRPLTAG MNPPVNMNID AVTLQFEKKD VSINPLAGSG VLDLIGYNYA HQTFEHHLEN FPKTPFIATE TTSGLQTRGY YDAVSDTIKK WPVRWDLKFT EGNPGNTVSA YDQVQTPWGS THEATWKIIK KHDFLAGMYV WTGFDYIGEP TPYEWPSVSS YFGIVDLAGF PKDVYYMYQS EWTDKTVLHI FPHWNWKAGQ TVDVWAYYNK ADEVELFVNG KSVGKRSKKG DDLHVMWRIP FEAGTLKAVS RKDGKVVLEK EIKTAGNPSQ LKLTADRSTI KADKNDLSFI TVDILDDKGT IAPNANNEIN FSLKGNGKIV GVCSGDPVSH ESYKGNKHTA LAGKCLVIVQ SGDKSGRLEL TAKANGLKQS TIVITTE
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