Gene Fjoh_0779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0779 
Symbol 
ID5093717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp865012 
End bp867495 
Gene Length2484 bp 
Protein Length827 aa 
Translation table11 
GC content37% 
IMG OID644740179 
Productglycoside hydrolase family protein 
Protein accessionYP_001193132 
Protein GI146298541 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3250] Beta-galactosidase/beta-glucuronidase 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCAGC TAACTTCATA TAAAAAACTA GGATTACTAT TTGCAGGCTT TCTTTTATTG 
ACAGCATGCA AGTCATCAAC AGATCAAAAA TTTAGTAACC GAAAAGTTTC TTTTAATGCA
GATTGGAGTT TCCACCTTAA CGACAGTATT GCAGATAAAG ATACTATTGG AGCGGGAACA
AAATGGAGAA CTTTAGACGT TCCGCATGAT TGGAGTATCG AAGGAAAATT TGATGAAAAA
AGTCCTGGCG GTTATGGCGG AGGATCGCTT AACGGAGGTT TGGGCTGGTA CAAAAAAACA
TTTAAAGTAG CTGCAGAAGA CAGCACAAAA GTAACTTCAA TCACTTTTGA CGGTGTTTAC
AAAAACAGTG AAGTCTGGGT AAACGGACAT TATTTAGGAA AACGTCCAAA CGGATATATT
GGTTTTCAAT ATGAAATTAC GCCGTACTTA AATTACGGAG ACAAAAACAA CGAAATAATT
GTTAAGGTTG ACAATTCAAA ACAACCTAAT TCACGCTGGT ATTCGGGTTC AGGAATTTTT
AGAAATGTTT GGCTTGAGAC CACAGATAAA CTTCATGTAG GACAATGGGG AACGTATATT
ACAACTCCAA AAGTTACAGC CGAAAAAGCT TCAGTAAGTA TTGAAACCAC AATAAAAAAT
CAATACAAAG AAGGTAAAAA AGCAACGGTA ACTACCACCA TTTTTAAAGA AGATAAAAAA
GTAACATCAG TTACTCAAGA TATAACAATC AACGCCAGCG AAAATCAAAC GCTGAATCAA
TCGGCGGAAG TTGAAAATCC GATTTTATGG TCAGATGAAA ACCCTGAATT GTACACAGCA
GTTACCGAAA TTTCACTTGA CGATAAAATC ATTGATCAAT ATAAAACCAC TTTCGGAATT
AGAGATTTTA AATTCGATTT GAACAAAGGT TTTATTTTGA ATGGAAAACA AGTCAAAATA
AAAGGTGTTT GTATGCACCA CGATTTAGGA CCATTAGGTT CTGCGATCAA CACGCGTGCA
ATCGAACGTC AGTTAGAAAT TTTGAAAGAA ATGGGCGTAA ACGGAATCAG AACTTCTCAT
AATCCGCCTG CTCCAGAGCT TTTAGAACTC TGCGATAAAA TGGGTTTCAT TGTTATGGAT
GAAGCTTTTG ATATGTGGAA ACAGACCAAA ACCAAATACG ATTACGGAAA CGATTGGGAC
AAATGGCACA AACAAGATTT AATCGATCAA CTGCTTCGCG ACCGAAATCA TGCCAGTATT
TTTATGTGGA GTATTGGAAA TGAAATTCCG GAACAATGGA GTGAAAAAGG TGTTGAAATT
GCGAAAGAAT TGGCCGCAAT TACACGTCAA TATGACAAAA CACGACCGTT GACTGCAGGA
ATGAATCCGC CAGTAAACAT GAATATTGAT GCCGTGACTT TACAATTTGA GAAAAAGGAT
GTTTCGATTA ATCCGCTTGC TGGATCTGGA GTTTTAGATT TAATTGGATA CAATTATGCG
CATCAAACTT TTGAACATCA TTTGGAAAAC TTTCCAAAAA CACCTTTTAT CGCAACTGAA
ACTACTTCAG GTTTACAGAC AAGAGGATAT TACGATGCCG TTTCAGATAC TATCAAAAAA
TGGCCGGTAA GATGGGATCT TAAATTTACA GAAGGAAATC CTGGAAATAC CGTTTCGGCT
TACGACCAAG TGCAAACGCC TTGGGGATCT ACACACGAAG CGACTTGGAA AATCATTAAA
AAACACGATT TCTTGGCAGG AATGTATGTT TGGACAGGCT TCGATTATAT CGGAGAACCA
ACTCCTTATG AATGGCCGTC TGTTAGTTCC TATTTCGGAA TTGTCGATTT AGCAGGTTTT
CCGAAAGACG TGTATTATAT GTACCAAAGC GAATGGACAG ATAAAACCGT TTTGCACATT
TTCCCACATT GGAACTGGAA AGCCGGACAA ACTGTTGATG TTTGGGCATA CTACAATAAA
GCCGATGAGG TGGAACTTTT TGTAAACGGA AAATCAGTTG GAAAAAGAAG TAAAAAAGGA
GACGATTTAC ATGTGATGTG GAGAATTCCT TTTGAAGCTG GAACTCTAAA AGCAGTTTCT
CGTAAAGACG GAAAAGTGGT TTTAGAAAAA GAAATCAAAA CAGCTGGAAA TCCTTCTCAA
TTAAAATTAA CTGCGGATAG AAGCACTATA AAAGCAGACA AAAACGATTT GTCATTTATC
ACAGTTGATA TTTTAGATGA TAAAGGAACG ATTGCACCAA ATGCGAATAA CGAAATTAAT
TTCTCTTTAA AAGGAAATGG AAAAATTGTA GGCGTTTGCA GCGGAGACCC AGTAAGTCAC
GAGTCTTACA AAGGAAATAA ACATACCGCT TTGGCTGGAA AATGTTTGGT TATTGTACAA
TCTGGAGATA AATCAGGAAG ATTGGAATTA ACCGCAAAAG CAAACGGATT GAAACAATCA
ACAATTGTAA TTACTACTGA ATGA
 
Protein sequence
MLQLTSYKKL GLLFAGFLLL TACKSSTDQK FSNRKVSFNA DWSFHLNDSI ADKDTIGAGT 
KWRTLDVPHD WSIEGKFDEK SPGGYGGGSL NGGLGWYKKT FKVAAEDSTK VTSITFDGVY
KNSEVWVNGH YLGKRPNGYI GFQYEITPYL NYGDKNNEII VKVDNSKQPN SRWYSGSGIF
RNVWLETTDK LHVGQWGTYI TTPKVTAEKA SVSIETTIKN QYKEGKKATV TTTIFKEDKK
VTSVTQDITI NASENQTLNQ SAEVENPILW SDENPELYTA VTEISLDDKI IDQYKTTFGI
RDFKFDLNKG FILNGKQVKI KGVCMHHDLG PLGSAINTRA IERQLEILKE MGVNGIRTSH
NPPAPELLEL CDKMGFIVMD EAFDMWKQTK TKYDYGNDWD KWHKQDLIDQ LLRDRNHASI
FMWSIGNEIP EQWSEKGVEI AKELAAITRQ YDKTRPLTAG MNPPVNMNID AVTLQFEKKD
VSINPLAGSG VLDLIGYNYA HQTFEHHLEN FPKTPFIATE TTSGLQTRGY YDAVSDTIKK
WPVRWDLKFT EGNPGNTVSA YDQVQTPWGS THEATWKIIK KHDFLAGMYV WTGFDYIGEP
TPYEWPSVSS YFGIVDLAGF PKDVYYMYQS EWTDKTVLHI FPHWNWKAGQ TVDVWAYYNK
ADEVELFVNG KSVGKRSKKG DDLHVMWRIP FEAGTLKAVS RKDGKVVLEK EIKTAGNPSQ
LKLTADRSTI KADKNDLSFI TVDILDDKGT IAPNANNEIN FSLKGNGKIV GVCSGDPVSH
ESYKGNKHTA LAGKCLVIVQ SGDKSGRLEL TAKANGLKQS TIVITTE