Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0778 |
Symbol | |
ID | 5093716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 862418 |
End bp | 864817 |
Gene Length | 2400 bp |
Protein Length | 799 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644740178 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001193131 |
Protein GI | 146298540 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACT CAAAAATAAC CACATTGCTT TCTGCGTTTA TGTTTGGATT TTTGGCAGTT CCAAATGCTA ATGCTCAGAT CCAAAATGCA GATGTATTAA ATGCTCCAAT AGATATCAGT AAAGATTTTC AGAATTATCT GAACACTTTT TATTTCGCAG ACGAACTGGC TTCTTTTGAT CCTGCAACAG GAAAAGGAAC GATCAAATAT CTGAGATACA ATTATAAAAC ACGTCAGGCT TTCAACAACA TGATGATGAA ACCAGATGTT GAAAAAGCAA ACGAATTTCC AACAACAGAA TATGCAGAAT CTCCTGTTTT GCCATTCGAA ATTCAGTTTG TTTCAGATAG AACAGTTAGA ATCAAAACTA CTTCTGGTCC GCAGTTTCAT CCACAAAAAG AGTCTTTAAT GCTGGTTGAC GGCGTTGCGC CAAATCACCC AGAATTATGG AAATATGCTA AAATTGAAGG AGGTCACAGC TATACAAGCA AACACGGAAG AGTTGAAATT TTGACAAAAC CTTGGCACGT AAAAATCTAC GATGAAAAAG GAAAATTGCT GACAAGTACA CTTCACGATA CTGATTTTAA AAACACCTAT ACGCCAACAC TTCCATTTTC TTACGTTCGC AGAAACAGCG ATTATTCAAG AAGTATGGGC GCAGCTTTCA GTTTAGAACC AGACGAAAAA ATATTTGGCT GCGGTGAATC ATTTACACAA TTCAACAAAC GTGGTTCAAA AGTAGTTTTA TGGACGGATG ACGCCAACGG AATCCAAAAT GAAACAATGT ACAAACCGAT TCCGTTTTAT ATGAGCAGCC GTGGTTACGG AGTTTTCATG CACCATTCAA CACCAATTAC AGTTGACTTC GGAAAATACT TTTCAAGTGC CAACGAAATG TACATTGGAG ATGACGAAGC CGATTTGTTT TTCTTTATCG GAGAACCAAA AGATATTTTA GATCAATACA CAAATCTGAC AGGAAAAGCA GCGATGCCAC CACTTTGGTC ATTCGGTTTC TGGATGAGTC GTATTACGTA TTTCTCAGAA AAAGAAGGGA GAGACGTTGC CAGAGATTTG CGTAAATACA AAATCCCAAC CGATGTTATT CATTTTGATA CAGGTTGGTT TGATGTAGAT TGGAGAAACA ATTATGAGTT TGCAAAATCT CGTTTCCCAG ATGCTACAAA AATGATGTCT GATTTAAAGA AAGATGGTTT CCAGGTTTGT CTTTGGCAGT TACCATATTT TACGCCAAAG AATACTTTGT TTCCAGAAAT CATGGATAAA AACTTAGCAG TAAGAGACAG AAAAGGAAAT CTTCCTTATG AAGATGCTGT TTTAGACTTC TCAAATCCAG AAACGATTTC TTGGTACCAA GGTAAATTGA AAAAGTTATT TGATGAAGGC GTTGCAGTTT TCAAAGTAGA TTTTGGAGAA GCCGCTCCGC CAGACGGAAT TTACCATTCT GGAAGAACAG GTTTCTATGA GCACAATTTA TACCCATTAC GTTACAACAA AGCAGTTGCA GAAATTACTC AGAAAGAAAA AGGATACACT TTAATCTGGG CAAGAAGTAC ATGGGCAGGA TCCCAGCGCT ATCCTTTACA TTGGGGAGGA GATTCTGAAA CAACAAACGG AGCGATGTCG GCAGAATTAC GCGGCGGACT TTCATTAGGT CTTAGCGGAT TCAGTTTCTG GAGCCATGAT GTAGGAGGAT TTGCAACAAA ATCGCCTGAG AATATTTACA GAAGATGGAC GCCTTTCGGA ATGTTCACGT CACACGTAAG AAGCCATGGA GAACCGCCTC GCGAACCTTG GTTGTACAGC AAGGAGTTCT TAGAAGGATT TAGAAAAGCA GATAATATGC GTTACGAGTT AATGCCATAT ATCTACGCTC AAGCAAAAGA AAGTTCTCAA AAAGGTTTGC CAATGATGCG CGCTCTTTTT GTAGAATATC CAAACGATCC AGGAGCTTGG TTAGTAGATA ATCAATATCT ATTTGGATCA AGTATGTTGG TTGCACCACT TTTTGAAGAG GTTGAAGAAA GAGACGTTTA TCTTCCAGAA GGCACTTGGA TCGATTACCA AACTAAAAAA GTGTACCAAT CTGGTTGGCA TAAAATCAAA GCTGGCGAAG TGCCAATCAT AGTTTTAGTA AAAGACGGAA CTGCAATTCC GCATATCGGT TTAGCGCAGT CGACAAAAGA TATGGATTGG AGCAAATTGA CATTGAAAGT TTACGCAAGC GACAAAACCA CTTCGGCAAC AGCTAAAGTA TTTTTACCTG AAGGTGACGC AGTACAAGAA ATAAAAGTGA ACAAAAACGG AAACAATTTT GAAGTAGCTA CAAATCCGTT AAACGGAAAA ACCACTTTTA AAACGGAGTG GGTTAAATAA
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Protein sequence | MKNSKITTLL SAFMFGFLAV PNANAQIQNA DVLNAPIDIS KDFQNYLNTF YFADELASFD PATGKGTIKY LRYNYKTRQA FNNMMMKPDV EKANEFPTTE YAESPVLPFE IQFVSDRTVR IKTTSGPQFH PQKESLMLVD GVAPNHPELW KYAKIEGGHS YTSKHGRVEI LTKPWHVKIY DEKGKLLTST LHDTDFKNTY TPTLPFSYVR RNSDYSRSMG AAFSLEPDEK IFGCGESFTQ FNKRGSKVVL WTDDANGIQN ETMYKPIPFY MSSRGYGVFM HHSTPITVDF GKYFSSANEM YIGDDEADLF FFIGEPKDIL DQYTNLTGKA AMPPLWSFGF WMSRITYFSE KEGRDVARDL RKYKIPTDVI HFDTGWFDVD WRNNYEFAKS RFPDATKMMS DLKKDGFQVC LWQLPYFTPK NTLFPEIMDK NLAVRDRKGN LPYEDAVLDF SNPETISWYQ GKLKKLFDEG VAVFKVDFGE AAPPDGIYHS GRTGFYEHNL YPLRYNKAVA EITQKEKGYT LIWARSTWAG SQRYPLHWGG DSETTNGAMS AELRGGLSLG LSGFSFWSHD VGGFATKSPE NIYRRWTPFG MFTSHVRSHG EPPREPWLYS KEFLEGFRKA DNMRYELMPY IYAQAKESSQ KGLPMMRALF VEYPNDPGAW LVDNQYLFGS SMLVAPLFEE VEERDVYLPE GTWIDYQTKK VYQSGWHKIK AGEVPIIVLV KDGTAIPHIG LAQSTKDMDW SKLTLKVYAS DKTTSATAKV FLPEGDAVQE IKVNKNGNNF EVATNPLNGK TTFKTEWVK
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