Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0727 |
Symbol | |
ID | 5090761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 802087 |
End bp | 804369 |
Gene Length | 2283 bp |
Protein Length | 760 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644740128 |
Product | patatin |
Protein accession | YP_001193081 |
Protein GI | 146298490 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCCTAA ATCAACATTC TAACGTAACT ACCCGATCAA AAGGATTCTT TTTAAATTCT ATTTGCATCG CGTCGTATGT ATTTTTTATG CTGCTAATAC TGTTTCCCGA AACTTCTTTT TCTCAGGAAA TAAAAAAAGA CAGCGTAAAA AGACCTAAAA TTGGTTTGGT TTTAAGCGGT GGCGGCGCCA AAGGTTTTGC ACATATTGGA GTTTTAAAAG TTTTGGAAGA AGCCGGAATC AAAATTGATT ATATTGGCGG AACAAGTATG GGATCTGTAA TTGGCGGACT TTATGCTTCT GGCTACAATG CATCTCAAAT TGATTCTATT TTCAAAAAAA CCAATTTCGA CGACCTTATT AACGATTATA TTCCGCGTTC ATCTAAAAAT TTCTACGGAA AGAAAAATGA TGAATTATAT GCAATAGTAC TTCCTTTCAG TAATTTTAGA GTCGGTATTC CCGAAGCACT TTCAAAAGGA ATGTACAACT ACAATTTATT GAGCAGTTTA ACGAGAAACG TTCGTCATGT ACGTGATTTT AATAAACTGC CAACTCCATT TTTATGTATC GGAACTAATA TTGAAACCGG CGAAGAAGTT TTGCTTAACA AAGGAAATCT TGTTCAGGCT ATGATGGCCA GTGCTGCTTT TCCGTCTTTG TTTACTCCGG TAGAAATAGA CGGCAATTTG TTAGTTGACG GTGGTGTTGT AAATAATTAT CCTATAAAAG AAGTTCGAAA TCTTGGCGCA GACATTATTA TTGGTGTTGA TGTTCAGGAT GATTTAATGA AACGAAAAAA CTTAAAAAAC GCAACCCGAA TCCTGGTTCA GATTACCAAT CTGCAATCTA TAGATAAAAT GAAAAACAAA ATAAAAGATA CGGATGTTTA CATAAAACCT GACATTCGTG ATTATGGCGT AATTTCATTT GACAAAGGCG AAGAAATCAT CAGAAAAGGT GAGGAAGCGG CTTTTGCTGT TTACGAAAAA ATCAAATCAT TGGTAAATGA AGATAACTTT TATAAAAAAC CAAAATTAAA AGTTGCTACA GACACACTTA AAATTGAAAA AATAAATTCT GATCCATTAG ACAATTATAC GAGAGAGTAC ATTCGAGGAA AACTTCGCTT TAAACCCGGA AGCACAATTA CGTATGACGA TCTTAAAACG GGAATCAATA ATTTAAATGC AACTCAAAAC TTTAGTACTA TTTCTTATTG TCTTCAGCCA AACGGAGAGA AAGATGATTT AGATTTGGTT TTAAAAGAAA ACCCTACTCA AACCTTTCTA AAACTAGGAC TTCATTATGA CGGACTATAC AAAAGTGCTG TTTTATTAAA CTTAACTCAT AAAAAGACTT TCTTAAAAAA TGATGTCACT TCGCTTGATA TTATTTTGGG AGATAATTTT AGATACGATT TAAATTATTA TGTAGAAAAT GGTTTCAATA TCAGTTTCGG TTTCCGTTCG CGACTAAGTC AGTTTAATAG AAACGTTACC ACGAGTTTGA GCGGTCTAAT TGCAGAGAAT CAAAATCTAA ATTTGATTAA TGTTGATTTC ATGGACTTGA GCAATCAGGC TTATTTTCAA ACCATTTTTG TGCAAAAGTT CTTAATGGGA GGCGGTTTAG AGTATAAATA TCTTAAGATA AATTCGCCAA CGCTTTCTAA TGCCGAAAAC ATAATTGACA AAAGTAATTA TTTCAGCGCC TTTGCTTATT TAAAGTACGA TTCGTTAGAT GATAAATATT ACCCAAGTTC TGGTTTATAT TTCTCTACAG ACTTACAAAC CTATTTAGCA TCATCAGATT ACACCAATAA GTTTAAACCT TTTTCAATTG CAAAAGCCGA ACTTGCTGTT GTAAGGCCAT TATTTAGAAA AGCCACAATA AAAGTTGGAG CCGATGCCGG TTTTAATATT GGCAGTGACA GCGTTCCGTT TTTTGATTTT ATACTAGGCG GTTATGGATA TAATAAGATT AACAACTTTA ATTATTTCTA TGGATATGAC TTTTTAAGTA TTGCCGGAAA TAGTTTTATA AAAGCTGACA TTGCTTTAGA TTACGAAATT TTTAAAAAGA ATCATATTAG TCTTTCGGCT AATTTTGCCA ATTTAGGAGA TGATATTTTC TCTTCTGTTG ACTGGGTTTC TATGCCAAAG TATACAGGAT ATGCAGTTGG TTATGGTTTA GAAACCATTA TTGGTCCAAT TGAAATAAAA CAATCCTGGT CTCCAGAAAT GTCAAAAAGT TTTACGTGGT TTAGCATTGG GTTTCAATTT TAG
|
Protein sequence | MRLNQHSNVT TRSKGFFLNS ICIASYVFFM LLILFPETSF SQEIKKDSVK RPKIGLVLSG GGAKGFAHIG VLKVLEEAGI KIDYIGGTSM GSVIGGLYAS GYNASQIDSI FKKTNFDDLI NDYIPRSSKN FYGKKNDELY AIVLPFSNFR VGIPEALSKG MYNYNLLSSL TRNVRHVRDF NKLPTPFLCI GTNIETGEEV LLNKGNLVQA MMASAAFPSL FTPVEIDGNL LVDGGVVNNY PIKEVRNLGA DIIIGVDVQD DLMKRKNLKN ATRILVQITN LQSIDKMKNK IKDTDVYIKP DIRDYGVISF DKGEEIIRKG EEAAFAVYEK IKSLVNEDNF YKKPKLKVAT DTLKIEKINS DPLDNYTREY IRGKLRFKPG STITYDDLKT GINNLNATQN FSTISYCLQP NGEKDDLDLV LKENPTQTFL KLGLHYDGLY KSAVLLNLTH KKTFLKNDVT SLDIILGDNF RYDLNYYVEN GFNISFGFRS RLSQFNRNVT TSLSGLIAEN QNLNLINVDF MDLSNQAYFQ TIFVQKFLMG GGLEYKYLKI NSPTLSNAEN IIDKSNYFSA FAYLKYDSLD DKYYPSSGLY FSTDLQTYLA SSDYTNKFKP FSIAKAELAV VRPLFRKATI KVGADAGFNI GSDSVPFFDF ILGGYGYNKI NNFNYFYGYD FLSIAGNSFI KADIALDYEI FKKNHISLSA NFANLGDDIF SSVDWVSMPK YTGYAVGYGL ETIIGPIEIK QSWSPEMSKS FTWFSIGFQF
|
| |