Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0725 |
Symbol | |
ID | 5090759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 799165 |
End bp | 800145 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644740126 |
Product | succinylglutamate desuccinylase/aspartoacylase |
Protein accession | YP_001193079 |
Protein GI | 146298488 |
COG category | [R] General function prediction only |
COG ID | [COG3608] Predicted deacylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.330277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAATA GTAAGCCCTT GGTTATTTTT GGCGAGTCGA TTCTGCCGGG AGAACATAAA ACCATAAATG TCGAAATAGC GCGATTGCAT ACTACGACAA AACTCAATAT TCCTGTAATT GTTCGTCGTT CAAAGCATGA AGGTCCGGTT GTTTTATTTT CGGCAGGAAT TCACGGCGAC GAAATAAACG GTGTAGAGGT TGTTCGACAA ATCATCAGTA AAAAAATAAA CCGCCCGCAG AGAGGAACAA TTATTTGTAT TCCAATTATC AACATGTACG GCTTTGTGAA TAAATCCCGC GAGTTTCCTG ACGGACGCGA TTTAAATCGT GTTTTTCCCG GAAGTAAAAA AGGTTCTTTG GCAAGCCGAT TTGCTTTTCA TATTGTCGAA CAGATTTTAC CCATTATAGA TTATGCAGTC GATTTTCATG CCGGAGGCGC AAGCCGTTTT AATGTACCGC AGATTCGAAT TACCGAAAAT AACATGGAGT TGAAATTACT GGCCGATATT TTTAATGCAC CTTTTACCTT GTATTCAAAA AATATTGGAG GCTCTTTTAG AAATACCTGC GAAAAAGCGA ATATTAAAAT GCTGCTTTTT GAAGGAGGAA AATCGCTTGA TATAAATAAT GCTGTTGCCA ATGAAGGAGT GAAAGGAGTG AAGCGGTTAT TGAATTATTT AAATATGCTG GATCCTAAGC ATATTGTAGA GCCGGCTTTA GAATCGTCTA TCTATATAAA ATATTCGGTT TGGCTGCGTG CAAAATGCTC CGGTTTGCTG CATGATTATA ATATGGCGGG TAAGTTTGTA ACCAAAGGTA CTATCTTAGC TATAATTACA GATCCGTTTG GAAAGTTTGA GCAGAAAGTA AAAGCGCCGC ATGACGGATA TGTTATTAAT GCCAATCATT CGCCAATTGT TTACGAAGGC GATGCAATTT ATCATATATC TAAAAATTCT CCTGTAAATG CCGACGAATA A
|
Protein sequence | MKNSKPLVIF GESILPGEHK TINVEIARLH TTTKLNIPVI VRRSKHEGPV VLFSAGIHGD EINGVEVVRQ IISKKINRPQ RGTIICIPII NMYGFVNKSR EFPDGRDLNR VFPGSKKGSL ASRFAFHIVE QILPIIDYAV DFHAGGASRF NVPQIRITEN NMELKLLADI FNAPFTLYSK NIGGSFRNTC EKANIKMLLF EGGKSLDINN AVANEGVKGV KRLLNYLNML DPKHIVEPAL ESSIYIKYSV WLRAKCSGLL HDYNMAGKFV TKGTILAIIT DPFGKFEQKV KAPHDGYVIN ANHSPIVYEG DAIYHISKNS PVNADE
|
| |