Gene Fjoh_0713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0713 
Symbol 
ID5090747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp786903 
End bp787658 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content36% 
IMG OID644740114 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001193067 
Protein GI146298476 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA CAGTTTTAAT TACTGGTGCT ACAAGTGGAA TTGGAAAAGC AACGGCTCAG 
ATTTTAGCAA AAAACAATTT TAAAATTATC CTTTGCGGCA GACGCAAAGA ACGTTTGGAA
GAATTAGAAA AAGAACTTTC TGCTTTTACA GATGTACATT CGCTTTCTTT TGATGTTCGT
GATAAAAATG ATGTTCTGGA AAAAATCGAA GCGCTTCCTG CTGAATTTTC AGATATTGAT
ATTTTAATTA ATAATGCCGG AAATGCACAC GGTTTAGATC CAATTCAAAC AGGAGATTTA
GATGATTGGG ATGCCATGAT TGATATTAAT GTAAAAGGAC TTTTGTATGT TTCTAAAGCG
GTAATCCCGA AAATGACTGC TAAAAAGTCC GGACACATTA TTAATATTGG TTCAACAGCT
GCAAAAGAAG TTTATCCAAA CGGAAATGTG TATTGCGGAA CTAAACATGC CGTTGATGCG
ATTACTGCGG GTATGCGAAT CGATTTAAAT CCATTTGGAA TTAGAGTTGG TGCTATTCAT
CCCGGAATGG TCGCAACAGA ATTTAGTGAA GTGCGTTTTA AAGGTGATGT CGAAAGAGCT
TCAAATGTTT ATAAAGGATT TGATCCGCTT CAGGCAGAAG ATATCGCAGA TATAATTCAT
TTTGTGGTTT CAAGACCGTA TCATGTAAAT ATTGCTGATT TAGTTGTAAT GAGCACCGCG
CAGGCATCTT CGACGATTGT TAAGAAGACA TTATAG
 
Protein sequence
MKKTVLITGA TSGIGKATAQ ILAKNNFKII LCGRRKERLE ELEKELSAFT DVHSLSFDVR 
DKNDVLEKIE ALPAEFSDID ILINNAGNAH GLDPIQTGDL DDWDAMIDIN VKGLLYVSKA
VIPKMTAKKS GHIINIGSTA AKEVYPNGNV YCGTKHAVDA ITAGMRIDLN PFGIRVGAIH
PGMVATEFSE VRFKGDVERA SNVYKGFDPL QAEDIADIIH FVVSRPYHVN IADLVVMSTA
QASSTIVKKT L