| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0668 |
|---|
| Symbol | |
|---|
| ID | 5091413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 731596 |
|---|
| End bp | 732063 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644740069 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_001193022 |
|---|
| Protein GI | 146298431 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAT TACCTCAAGA AAAATTTGAA ACTCTTGGTT TGTCTTTACC GCCGGCGCCT
CAGCCTCTGG GCATATACAA ACCCTATTTA GTTGATGGTA AATATTTATA CCTTTCTGGT
CACGGGCCGG TTAGAGACGA CAAATCCTTA ATCATTGGCC GAATTGGCGA TGATATGGAT
ATCGAAGAAG GAAAATTAGC CGCAAGACAA GTGGGTTTAA CTATGCTTTC TACAATTGTA
ACCAATTTTG GAAGCCTGAA TAAAGTAAAA AGAGTCATAA AAGTTTTAGG AATGGTCAAT
TGCAGCGGCG ATTTTTTAAG ACATCCCTAT GTAATAAACG GCTGCAGTGA ATTATTTGCC
GAAGTCTGGG GACAAGAAAA CGGAATTGGA GTAAGAAGCG CCGTAGGAAT GGGTTCTCTC
CCAGACAATA TTCCTGTTGA AGTTGAAGCT GTTTTCGAAT TATTCTAA
|
|---|
| Protein sequence | MNLLPQEKFE TLGLSLPPAP QPLGIYKPYL VDGKYLYLSG HGPVRDDKSL IIGRIGDDMD
IEEGKLAARQ VGLTMLSTIV TNFGSLNKVK RVIKVLGMVN CSGDFLRHPY VINGCSELFA
EVWGQENGIG VRSAVGMGSL PDNIPVEVEA VFELF
|
|---|
| |