| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0604 |
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| Symbol | |
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| ID | 5090910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 654138 |
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| End bp | 658010 |
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| Gene Length | 3873 bp |
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| Protein Length | 1290 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 644740004 |
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| Product | PKD domain-containing protein |
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| Protein accession | YP_001192958 |
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| Protein GI | 146298367 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAACA ATCTTAAAAT AAAAAAATAC TGGATAACCA CTTTTTGCTT GGTGTTCTTT
TCATTGTTTT CATTTGCACA GGAATTAAGT GATGAAACTA TTGGGTTTAA TGTGGTTGAT
TATACTGCTT TTCTTAAAAA TCGTGGTGTA ACTGATAAAG ACATGAAATC AGAACTTTCA
AAATTAAGAA AGACAAGATT ATCTGATTAT TTGGAGATGA AAAAATCTGA AAATGATTTT
TTACAAATGA ATATAAATGA AAATAAAGTA AAACAATCAA GATCCTCTAT CAACTCAAAA
ACTGCTGTCC TTGACATCCC TCAAATTGAA AAAGATGCGC TTCTGGCTTT TTACAATAGC
ACCAATGGAT CAAACTGGCT TTTAAAAAAA GGTTGGGATT TTTCTACACC AGTAACAACT
TGGGATGGTT TTTCACAAAC AGGATGGTAT GGAATTACTA TAACTGATGG TCATGTAACA
AAGATTACTG ATATTTTAAA TGCAACTGGT ACATTACCTG ATTTATCAGC TTTACAGTAT
CTCAAAGAAC TATATATTTT TAATTCTTCT TTTACTGGTA ATTTGACTGG ATTACAAAAT
TTAAATAATT TAGAAAAGCT GAGAATTGGC TGGTCGACTT CTTCTCAAAG TAGTTTTCAG
GATTTAAATC CTCTTAGTAA ATTAACTAAT TTAACAGAAT TATGTCTCCA TAGTTGCAAT
TTCACTAATA ATAGCATTCC TTCAGATTTT ACAAAACTAG TTAATCTCAA AAAATTAGAA
ATTCGTTTTG GAAATGTTAA CCAAAACTGG GAAGTATTAG GTAACTTAAC AAATTTAATC
CATCTAAATT TAGGCAATAA TAATTTTGCT TCTCAAAACA CTACATTAGT TGTACCACCA
AATTTTGCTA ATCTTACGAA ACTCGAAATA CTAGACTTAT CCAATAATAA AATAAAAGAT
ATTTCAGTAA TCAACAACAT GAAAGAACTG AAATACCTAA ATGCACAGTG GAACGAAATA
TCTACAATAC CGTCTGGTTT TAGTGAATTA ACAAAATTAA ATTACATACG ATTAGGACAA
AACAAAATAA AAGGAAATTT TCCATCATAT CTTCAAAATC TTCAACTCAA TACCTTTGAA
ATATCAAGTA ATGAGTTTGA AGGAAAAATA CCTGCTCTAA ATTTTGATTT AGCTAATTCA
ACTGTAAATT ATTATATAGC CGGTCAAGGA GTGGCATTTT TAAATAAAAC TTTGGGTATT
TATGACAATA AATTTCGTTT TATAGATTTT GCAAACGAAT TTGAAATTTA CAAAACAAAA
ATAGCATCAA ATTATTTTAC TTATCAATAT CAAAAAAGAA TAAACGTAGT TGAAACCATA
ACAAAAGGAA TAGGACAATC TGTAACATTA AAAATGTTTC CAGAAGGAGA CAGTCGTTAT
TTAAACGATG ACACTTTTAA ATGGTTCAAA AATGGAGTTG AAATTATTGG AGCAACTGAA
CGAACTTATA CGTTAACAAA TTTAACTGCA GCAAATGCAG CAACATATAT TTGCAGATCT
TATCATACTA GCAATCCCGA TATGTCTGCT CTTACACTAG AAAGAGAACC TATAACATTA
AAAGTTGTAA ATTGTACTCC ATTAACCGGA AACATAACAT CAACAACAGA TAAATTTCAC
ACAGGAGGAG AAAGCAATTT CGCATTTCAA ACTACTGCAA CAGGTTTAAG CTATGAATGG
TCTGTAACAA CTGCAGAAGG CCTTCCAGTT AACGAAATTC CATCAAATAC TTTGGAAATT
TACACTTATA CCTTTACAAA TCCCGGAGAT TATATTGTGA AAGTAAAAGC TACAGATTCA
ACTGGCTGTA CAACAGAATT TACAAAAGAA ATAACCGTAA CAGAAAGATA TTGCGACAAC
GAACCAGTTG ATTTTTCTTT TGAAACAACA GCAACAAATT TAACTTATAC TTGGACCACA
ACTGATTCAA CAGGAAAAGT TGTAAACCGA GTAACAGATA CAACTGGACT TTATACTTTT
ACCCCTCAGG TATCTGGGGA ATATGTAATC GAATTGGTAG CAAGCAGTGC AACAAGCTGT
AAAACGTTAT TCACGAAAAA TATCACAATC GATCAATGTA CACCCTATAT TTCTTGTACG
AGAGACAACC CACTTTCGCC AGAAATACAC CGTTTGTTTA TCAATATGAT TACCAAATTA
ACTTCAGCAC CTGCAGGAAC AAATGTAAAT GTTTATGCGC ATAAAGAAAT TGCGGCTGTT
GCTCCTTACA CAACAGAAAA AACTGCGAAG ATTTACAACT TTGTCAATAA TGGTACTGCG
ATAAGTTTTT CATTTACAGA AAACGGAACC GACGATGTAT ATATTCCAAA AGCTTCTACA
GGATCTGTTA CCGCTATAGA TTTAAGCAAA TATGTTGATT CTGTAACTTC AACAATAGTT
GCTACAAGCT ACAGTAATGG AACAACTAAT AATTCTGACG GCCGCGTTAA AAACATCGAC
TTCTGTCCTA AAGAACTATC GTGTGTTTCT CACGTAGCAC TTGTAGTAGA CGAGTCTGGT
TCTTTAGATC AGTCTGAAAT TAATAAAATT AAAAAACAAT TAAAATTATT TGTTGCGCAG
CAAGCATTTA CAAATGATGA TATAGGATCT AATATTCATA TTTCAATAAC AGGAATGTCT
GATAGTGATG ATGTGAATAA AAGGAGAAAG GATTTTATTA TTCCAACTAA AGTAACGGCT
AGCAATGTAT ACTTATTTAA TAACTGGATT GAGAAACTAG GAAAAAGATA TGGTGACACT
ATTGGTATAA GTCAGGCTTC CGATTTTTGG AAAAGTGGTC TTGACGGTGC TTTAAGCTAT
AGTATGAAAC CAAATTTTGT TATCATGATT ACCGACGGTG CTCAGACAGA TGATGTTACG
GGCTTGAAAG AAACATTGGC TAAGTTTGAC AACAATAACA AAACGGTAAC TGATCCAAAA
TTACCGCACT TATATGTAGT GGGAATTGAA AATGGAGTTT ATATAGATCG TAACTCACTT
ACCGGCAAAG CACTGCCTAG AAATGAAGAT CCAAATTACA ATTCGGCAAT TGGTTCACAA
AACAATCTAA CGGCTAAAAC AACACCGTTC CTTACAAAAT CATTACAATT TTTGTTAGAT
CTTTCGCCAA CTGAGTTCCC AGTGGCAGAT ATCAATCAGT TTACTGTGGG TACTTATTTC
GGACATTCTA ATTTTGATTT GTTAGCATCA GATGAAACCT ATTTCTCTGA CAAACTTATT
GTTGGAGAGG TTGTCTGCGG TACACCTGCT GTAAAAGATT CTTGTGATGA CTGTTTCTCT
TTCAAACCAG AACCAGGAAA AGAATATGTT TTAAGTGCAT GGGTAAAAGA AGAATCTAAC
GAACAGGTTA AAACATATGT AAATCCATTA ATCAAAATCA AATTTTATAA TAATAAAGAA
GCTCTTGATA TTCCTGCACA CAAAATTGAT TCTTTATCTA TAAAAGGAAG TGGCGATATT
ATTGATGGAT GGCAGAGAGT CGTTAAAAAA TTCAAAATAC CAAACAATAC TATTACACTT
GGTATTGAAT TAGAAAACTT AAGCCCAAGC ATACCTGTTT ATTTTGACGA TATCAGGATT
CATCCTCTTC AGGGAAGTGT AAAATCATTT GTTTACGATC CTGAGACATT CAAGTTAATG
TCTGAGTTAG ATGAAAACAA CTATAGTACA TTCTATGAAT ATGACAATGA AGGCGGACTG
GTACGTGTTA AAAAAGAAAC TGCAAAAGGT ATCAAAACCA TTCAGGAAAC ACGATCTGGG
AACGTAATAG AAACGACAAA TACAACACCA TAA
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| Protein sequence | MTNNLKIKKY WITTFCLVFF SLFSFAQELS DETIGFNVVD YTAFLKNRGV TDKDMKSELS
KLRKTRLSDY LEMKKSENDF LQMNINENKV KQSRSSINSK TAVLDIPQIE KDALLAFYNS
TNGSNWLLKK GWDFSTPVTT WDGFSQTGWY GITITDGHVT KITDILNATG TLPDLSALQY
LKELYIFNSS FTGNLTGLQN LNNLEKLRIG WSTSSQSSFQ DLNPLSKLTN LTELCLHSCN
FTNNSIPSDF TKLVNLKKLE IRFGNVNQNW EVLGNLTNLI HLNLGNNNFA SQNTTLVVPP
NFANLTKLEI LDLSNNKIKD ISVINNMKEL KYLNAQWNEI STIPSGFSEL TKLNYIRLGQ
NKIKGNFPSY LQNLQLNTFE ISSNEFEGKI PALNFDLANS TVNYYIAGQG VAFLNKTLGI
YDNKFRFIDF ANEFEIYKTK IASNYFTYQY QKRINVVETI TKGIGQSVTL KMFPEGDSRY
LNDDTFKWFK NGVEIIGATE RTYTLTNLTA ANAATYICRS YHTSNPDMSA LTLEREPITL
KVVNCTPLTG NITSTTDKFH TGGESNFAFQ TTATGLSYEW SVTTAEGLPV NEIPSNTLEI
YTYTFTNPGD YIVKVKATDS TGCTTEFTKE ITVTERYCDN EPVDFSFETT ATNLTYTWTT
TDSTGKVVNR VTDTTGLYTF TPQVSGEYVI ELVASSATSC KTLFTKNITI DQCTPYISCT
RDNPLSPEIH RLFINMITKL TSAPAGTNVN VYAHKEIAAV APYTTEKTAK IYNFVNNGTA
ISFSFTENGT DDVYIPKAST GSVTAIDLSK YVDSVTSTIV ATSYSNGTTN NSDGRVKNID
FCPKELSCVS HVALVVDESG SLDQSEINKI KKQLKLFVAQ QAFTNDDIGS NIHISITGMS
DSDDVNKRRK DFIIPTKVTA SNVYLFNNWI EKLGKRYGDT IGISQASDFW KSGLDGALSY
SMKPNFVIMI TDGAQTDDVT GLKETLAKFD NNNKTVTDPK LPHLYVVGIE NGVYIDRNSL
TGKALPRNED PNYNSAIGSQ NNLTAKTTPF LTKSLQFLLD LSPTEFPVAD INQFTVGTYF
GHSNFDLLAS DETYFSDKLI VGEVVCGTPA VKDSCDDCFS FKPEPGKEYV LSAWVKEESN
EQVKTYVNPL IKIKFYNNKE ALDIPAHKID SLSIKGSGDI IDGWQRVVKK FKIPNNTITL
GIELENLSPS IPVYFDDIRI HPLQGSVKSF VYDPETFKLM SELDENNYST FYEYDNEGGL
VRVKKETAKG IKTIQETRSG NVIETTNTTP
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