Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0588 |
Symbol | |
ID | 5090894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 627161 |
End bp | 627877 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644739987 |
Product | uroporphyrin-III C/tetrapyrrole methyltransferase |
Protein accession | YP_001192942 |
Protein GI | 146298351 |
COG category | [R] General function prediction only |
COG ID | [COG0313] Predicted methyltransferases |
TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.174365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAT TATATATCGT TCCAACGCCA ATTGGCAATC TTGAAGACAT GACTTTTAGA GCCATTCGGG TTTTAAAAGA AGTCGATTTG ATTTTGGCTG AAGACACCCG AACAAGCGGT AAACTCTTAA AGCATTTTGA AATTGGCACG CACATGCACA GCCATCACAT GCATAACGAG CATAAAACTA CCGAAAATTT AATTGCAAGA TTAAAAGCCG GCGAGACTAT TGCTTTAATT TCAGATGCAG GAACTCCGGC AATTTCAGAT CCTGGATTTT TGCTGACACG TGCTTGTGTA GAAAATAAAA TTGAAGTAGA ATGTCTTCCA GGCGCAACGG CTTTTGTTCC CGCTCTTGTA AACAGCGGAC TTCCAAATGA TAAATTTGTT TTTGAAGGTT TTCTGCCTGA TAAAAAAGGA CGTCAGACTC GTTTTTTGGC TTTAGCCGAA GAAACCAGAA CCATGATTTT ATACGTTTCT CCGCATAAAC TCGTTAAGAC TTTAGCAGAA TTTGTGCAAT ATTTTGGAGA GGACAGACAA GTCTGCGTTT CGAGAGAATT ATCAAAATTA CACGAAGAAA ATGTGCGCGG AACAGCAAAA GAAGTTCTGG CGCATTTTGA AAAAACAGCA CCACGCGGCG AAATCGTCGT TGTTGTTGCC GGAAAAACCA TAACAAAAGA AGCTAAGAAA AGTAAATTTT CGAAGGACGA AGAATAA
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Protein sequence | MSKLYIVPTP IGNLEDMTFR AIRVLKEVDL ILAEDTRTSG KLLKHFEIGT HMHSHHMHNE HKTTENLIAR LKAGETIALI SDAGTPAISD PGFLLTRACV ENKIEVECLP GATAFVPALV NSGLPNDKFV FEGFLPDKKG RQTRFLALAE ETRTMILYVS PHKLVKTLAE FVQYFGEDRQ VCVSRELSKL HEENVRGTAK EVLAHFEKTA PRGEIVVVVA GKTITKEAKK SKFSKDEE
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