Gene Fjoh_0550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0550 
Symbol 
ID5089496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp586772 
End bp588067 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content34% 
IMG OID644739949 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_001192904 
Protein GI146298313 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATC TAGTTGAAGA ATTAAAATGG CGCGGTTTGT ACCATGATAG CATGCCAGGA 
ACGGAAGAAC AATTGCTAAA AGAGGTAACA TCGGCCTATA TTGGTTTTGA TCCAACGGCA
GATTCACTGC ATATAGGCAG TATGGTTCAG ATTATTTTAT TGGTACATTT AAAGAATTTT
GGTCATCAGC CAATTGCTCT TGTGGGCGGT GCGACCGGAA TGATTGGTGA CCCATCTGGG
AAATCTGACG AAAGAAATCT GCTTAACGAA GAAACCCTGG CTAAAAATGT TGCCGGCATT
AAAAGTGTTT TGTCTCGTTT CTTAGACTTT AATTCAAAAG AACAAAATGC CCCAATTATG
GTAAATAACT ATGATTGGAT GAAAGAATTC TCGTTTATTG ATTTTGCTCG TGAGGTTGGA
AAACGCATTA CAGTAAATTA TATGATGGCG AAAGATTCTG TTAAAAAAAG AATCAATGGA
GAAGGTGAGG GAATGTCTTT TACAGAGTTT ACTTATCAAT TAATTCAGGG TTACGATTTT
TATCATTTAT ATAAAAATAA TAACTGCCTT TTGCAAATGG GAGGTTCTGA CCAATGGGGA
AATATTACCA CGGGAACAGA ATTAGTACGC AGAATGGGCG GGGAAAATGC AAAAGCTTTT
GCTTTAACAA CACCTTTAAT TACAAAAGCG GACGGATCTA AATTTGGAAA ATCTGAAGGA
GGAAATGTTT GGCTGGATGC TGATAAAACT TCAGTGTACA AATTTTACCA GTTTTGGGTA
AATGCTACAG ATGCTGATGC TGAAAAATAT ATCAAGATAT TTACTTTCTT AGATAAAGAA
ACAATTGATG CTTTAATTGC TGAGCACCAA ACTGCTCCTC ATTTAAGAAT TCTGCAAAAG
AAATTAGCTG AAGAAATCAC GATTTTTGTT CACAGTAAAG AAGAATTAGA AAAAGCAATT
CAGGCTTCGA ATATTTTATT TGGAAATTCA ACTGCTGACG ATTTGAAAAA ACTAGATGAA
AAGACTTTCT TAGAAGTTTT TGATGGGGTT CCACAGGCTG AAATCGCAAA AGCAGATCTA
GAAAACGGAT TGGATATTGT TACTGTTTTA AATGAAAAAA CAGGTTTCTT TAAATCTAAC
GGAGAAGCAA GACGTGCCTT AACTGCAAAT TCTATTTCTG TAAACAGAGA AAAAATAAAA
GAAGATTTTG TTTTAACTGC AAATGATTTA ATTAATAATC AGTTTGTGTT ATTACAAAGC
GGTAAAAAGA ATTATTTTGT AATTCGAGTG GTTTAA
 
Protein sequence
MKNLVEELKW RGLYHDSMPG TEEQLLKEVT SAYIGFDPTA DSLHIGSMVQ IILLVHLKNF 
GHQPIALVGG ATGMIGDPSG KSDERNLLNE ETLAKNVAGI KSVLSRFLDF NSKEQNAPIM
VNNYDWMKEF SFIDFAREVG KRITVNYMMA KDSVKKRING EGEGMSFTEF TYQLIQGYDF
YHLYKNNNCL LQMGGSDQWG NITTGTELVR RMGGENAKAF ALTTPLITKA DGSKFGKSEG
GNVWLDADKT SVYKFYQFWV NATDADAEKY IKIFTFLDKE TIDALIAEHQ TAPHLRILQK
KLAEEITIFV HSKEELEKAI QASNILFGNS TADDLKKLDE KTFLEVFDGV PQAEIAKADL
ENGLDIVTVL NEKTGFFKSN GEARRALTAN SISVNREKIK EDFVLTANDL INNQFVLLQS
GKKNYFVIRV V