| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0529 |
|---|
| Symbol | |
|---|
| ID | 5089475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 558881 |
|---|
| End bp | 560458 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644739928 |
|---|
| Product | carboxyl-terminal protease |
|---|
| Protein accession | YP_001192883 |
|---|
| Protein GI | 146298292 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTA ATCCCAAATA TCTGCCAATT GTTATTGGAG CAACATTTGC TCTGGGAACT
GTGATAGGAA GTTTAACAAA CGGTCCTGCA GATGATCAGC TTTTGGCTAA AAATTACTCC
AAAACAAAGC TGAATAAACT AATTGATTTT ATCAATACTG AGTATGTTGA CAGTGTCAAT
ACCGATTCGA TTGTAAATCT TACCGTCGAT AATATTCTCT CAAAATTAGA TCCGCATTCT
GTTTACATTC CGCCAAGCGA ACAAGCTGAG GTTGCCGAAA GCATGAAAGG TGATTTCGTT
GGAATCGGAA TTAACTTCTA TATGTACAAA GATTCTGTTG CGATTATAAA ACCAGTCGAA
AACGGACCTT CTGCAAAAGC AGGATTAAAA TCCGGAGACC GAATTTTATA TGCAGGAAAA
ACCAAATTGT ATGGAAGAAG ACTACCTTCG GATAGTTTGT TCTCAAAATT AAAAGGAATT
AAAGGTTCTG AAATAGAATT GACTGTTTTT AGAAAATCAG AACAAAAGAA ATTGAAGTTT
AAAATTAAAA GAGATGTTAT TCCAATAAAA AGCGTTGATG CTTCTATATT AATTGGAAAT
AATACAGGTT ATATCAAAAT CAATCGTTTT GCCGAAACTA CTTTTAATGA ATTCAAAACA
GGTTTAGCAC GATTAAAACA AAAAGGAATT CAGTCGCTCG TGATTGACCT TCGCGATAAT
GGCGGCGGTT ATATGGAAGA AGCGATTGCC ATTGCAGATG AATTCTTAAA AGACAAACAA
CTGATTGTTT TTACCAAAAA TAAAAACGGA ACAACCGAAA AAACATACGC GACAAAAGCC
GGAAGTTTTG AAACCGGAAA AGTATATGTT TTAATCAATG AAAATAGTGC TTCTGCCAGT
GAAATTCTTG CCGGAGCTAT TCAGGATAAT GACCGCGGTA CAATTGTAGG CCGTCGTTCT
TTCGGGAAAG GTTTGGTACA GCGCGAAATG GATTTCAACG ATGGATCAGC AGTTCGTTTA
ACGGTTGCGA GATATTATAC GCCAACAGGA AGATCAATCC AGAAACCGTA TAAAAAAGGA
AACGATGAAT ATTTTAAAGA ATCTGAATCG AGAATCGCAA CAGGCGAATT ATACGCAAAA
GACAGTATTA AAGTAGCAGA TTCTTTAAAA TTTAAAACTC CAAAAGGAAA AATCGTTTAC
GGTGGCGGCG GAATCGTTCC GGATGTTTTT GTTCCGATGG AAGCTGAACA TGGAAACGAA
AATGTGGCCT ATCTGCTTCA AACCGGTATC GTAGGACACT TTGTTTTTGA AGAATTGGAT
AAAGACCGCG ATGCTTTTGC CGGACTTAAG TTTAATGAGT TCTTAGAAAA GATAAAATCA
TCTGATGTCT ATTTTAAAAA GTTTAAAAAC TATATTTATA TGACTGGTTT AGATCTAAAA
CTGGATAAAA CCAAAGCATT AGTAAATAGG TACATAACAG CAGAATTTGC TCGTCAATTA
TATGGAGAAA TATATTATTA TGATGTTGTT TTAAAAGATG ACGCCATGAT AAAAGCGATC
CTAAATCCAA AGAAATAA
|
|---|
| Protein sequence | MKFNPKYLPI VIGATFALGT VIGSLTNGPA DDQLLAKNYS KTKLNKLIDF INTEYVDSVN
TDSIVNLTVD NILSKLDPHS VYIPPSEQAE VAESMKGDFV GIGINFYMYK DSVAIIKPVE
NGPSAKAGLK SGDRILYAGK TKLYGRRLPS DSLFSKLKGI KGSEIELTVF RKSEQKKLKF
KIKRDVIPIK SVDASILIGN NTGYIKINRF AETTFNEFKT GLARLKQKGI QSLVIDLRDN
GGGYMEEAIA IADEFLKDKQ LIVFTKNKNG TTEKTYATKA GSFETGKVYV LINENSASAS
EILAGAIQDN DRGTIVGRRS FGKGLVQREM DFNDGSAVRL TVARYYTPTG RSIQKPYKKG
NDEYFKESES RIATGELYAK DSIKVADSLK FKTPKGKIVY GGGGIVPDVF VPMEAEHGNE
NVAYLLQTGI VGHFVFEELD KDRDAFAGLK FNEFLEKIKS SDVYFKKFKN YIYMTGLDLK
LDKTKALVNR YITAEFARQL YGEIYYYDVV LKDDAMIKAI LNPKK
|
|---|
| |