Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0517 |
Symbol | |
ID | 5089830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 546662 |
End bp | 547489 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644739916 |
Product | prephenate dehydratase |
Protein accession | YP_001192871 |
Protein GI | 146298280 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.72305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACGA AAATTGCAAT ACAAGGTATT AAAGGATCAT TTCATCATCA GGTTGTAAAA GAGTATTTCT CTGAAAATGT GGATATTGAT GAGTGTTTGT CTTTTGAAGA ATTGATCGAC AGCCTTATTG CCGGAAAATC TGATCAGGCT GTTATGGCGA TCGAAAATTC AATTGCAGGG CCGATTATCC CGAATTATGC ATTGATTGAC AAGAACAATC TGCACATAAT TGGAGAGCAT TATTTAAACA TTCAGCAGAA TTTAATGGCT TTAAAAGGTC AGAAAATTGA AGATATAAAA GAAGTTCATT CGCACCCAAT GGCACTTTTG CAGTGTATGG ATTTCCTGAA ACAATATCCA AATATCAAAT TGATTGAGGA TAAAGATACA GCCGAAACGG CAAGAAGAAT TCAGGAAAAG CAGTTAACCG GAATTGCAGC AATTGCAAGT GTAACAGCTT CTGAAATGTA CGATCTTGAT ATTATAGCGT CATCGATTCA AACGATCAAA AACAATATGA CTCGTTTCGT AATCATTAAA AAGCAAAATT CATTTTTGCC GGAAAGCGAA ATCAACAGAG CGTCAATCAA ATTTGAATTG GATCACAAAA GAGGAAGCTT AGCAGCGGTT TTAAATGTAA TGAGCGACTG CAAACTGAAT TTGACAAAAA TCCAGTCGCT TCCAAAAATT GAAACACCTT GGAAATATTC ATTCTTCGTA GATGTAACAT TTGAGAAATA CGAAGATTTT GCAAAAGCCA AAGCATTATT AAATATAATG GCAGAATATT TTAAAGTATT GGGAGAATAT AAAAATACCA GACCTTAA
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Protein sequence | MTTKIAIQGI KGSFHHQVVK EYFSENVDID ECLSFEELID SLIAGKSDQA VMAIENSIAG PIIPNYALID KNNLHIIGEH YLNIQQNLMA LKGQKIEDIK EVHSHPMALL QCMDFLKQYP NIKLIEDKDT AETARRIQEK QLTGIAAIAS VTASEMYDLD IIASSIQTIK NNMTRFVIIK KQNSFLPESE INRASIKFEL DHKRGSLAAV LNVMSDCKLN LTKIQSLPKI ETPWKYSFFV DVTFEKYEDF AKAKALLNIM AEYFKVLGEY KNTRP
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