Gene Fjoh_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0517 
Symbol 
ID5089830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp546662 
End bp547489 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content34% 
IMG OID644739916 
Productprephenate dehydratase 
Protein accessionYP_001192871 
Protein GI146298280 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0077] Prephenate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.72305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACGA AAATTGCAAT ACAAGGTATT AAAGGATCAT TTCATCATCA GGTTGTAAAA 
GAGTATTTCT CTGAAAATGT GGATATTGAT GAGTGTTTGT CTTTTGAAGA ATTGATCGAC
AGCCTTATTG CCGGAAAATC TGATCAGGCT GTTATGGCGA TCGAAAATTC AATTGCAGGG
CCGATTATCC CGAATTATGC ATTGATTGAC AAGAACAATC TGCACATAAT TGGAGAGCAT
TATTTAAACA TTCAGCAGAA TTTAATGGCT TTAAAAGGTC AGAAAATTGA AGATATAAAA
GAAGTTCATT CGCACCCAAT GGCACTTTTG CAGTGTATGG ATTTCCTGAA ACAATATCCA
AATATCAAAT TGATTGAGGA TAAAGATACA GCCGAAACGG CAAGAAGAAT TCAGGAAAAG
CAGTTAACCG GAATTGCAGC AATTGCAAGT GTAACAGCTT CTGAAATGTA CGATCTTGAT
ATTATAGCGT CATCGATTCA AACGATCAAA AACAATATGA CTCGTTTCGT AATCATTAAA
AAGCAAAATT CATTTTTGCC GGAAAGCGAA ATCAACAGAG CGTCAATCAA ATTTGAATTG
GATCACAAAA GAGGAAGCTT AGCAGCGGTT TTAAATGTAA TGAGCGACTG CAAACTGAAT
TTGACAAAAA TCCAGTCGCT TCCAAAAATT GAAACACCTT GGAAATATTC ATTCTTCGTA
GATGTAACAT TTGAGAAATA CGAAGATTTT GCAAAAGCCA AAGCATTATT AAATATAATG
GCAGAATATT TTAAAGTATT GGGAGAATAT AAAAATACCA GACCTTAA
 
Protein sequence
MTTKIAIQGI KGSFHHQVVK EYFSENVDID ECLSFEELID SLIAGKSDQA VMAIENSIAG 
PIIPNYALID KNNLHIIGEH YLNIQQNLMA LKGQKIEDIK EVHSHPMALL QCMDFLKQYP
NIKLIEDKDT AETARRIQEK QLTGIAAIAS VTASEMYDLD IIASSIQTIK NNMTRFVIIK
KQNSFLPESE INRASIKFEL DHKRGSLAAV LNVMSDCKLN LTKIQSLPKI ETPWKYSFFV
DVTFEKYEDF AKAKALLNIM AEYFKVLGEY KNTRP